Job Description P31441 Confidence 97.96% Date Thu Jan 5 11:47:32 GMT 2012 Rank 143 Aligned Residues 232 % Identity 10% Template c3irsB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein bb4693; PDBTitle: crystal structure of uncharacterized tim-barrel protein bb4693 from2 bordetella bronchiseptica Resolution 1.76 Å

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		87	.	.	90	.	.	.	.	.	.	.																															.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	A	H	L	H	I	E	S	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	V	T	F	E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																												.
Template Sequence		I	D	F	R	L	R	P	P	A	M	G	F	L	N	A	R	I	Y	T	R	P	D	I	R	N	R	F	T	R	Q	L	G	F	E	P	A	P	S	A	E	E	K	S	L	E	L	M	F	E	E	M	A	A	A	G	I	E	Q	G	V	C	V	G	R	N	S	S	V	L	G	S	V	S	N	.	A	D	V	A	A
Template Known Secondary structure				S	S	B			S	S	T	T	G	G	G	S																	T									T	T													T												T	T	T						.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	P
Query Conservation
Alig confidence															.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		V	A	K	A	Y	P	D	K	F	H	P	V	G	.	.	.	.	.	S	I	E	A	A	T	R	K	E	A	M	A	Q	M	Q	E	I	L	D	L	G	I	R	I	V	N	L	E	P	G	V	W	A	T	P	M	H	V	D	D	R	R	L	Y	P	L	Y	A	F	C	E	D	N	G	I	P	V	I	M	M	T	G
Template Known Secondary structure						S	T	T	T						.	.	.	.	.					S	S														T	T								G	G	G	S	S	S				T	T		G	G	G										T	T								S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		217	.	.													220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.	.
Query Sequence		G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	L	N	A	Y	I	T	A	G	I	E	N	C	H	E	S	Y	Q	.	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	.	.	.	A	A	R	N	L	N	A	L	A	P	L	I	N	E	F	N	S	P	Q	C	M
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.																					.	.	.
Template Conservation
Template Sequence		G	N	A	G	P	D	I	T	Y	T	N	P	E	H	I	D	R	V	L	G	D	F	P	D	L	T	V	V	S	S	H	G	N	W	P	W	V	Q	E	I	I	H	V	A	F	R	R	P	N	L	Y	L	S	P	D	M	Y	L	Y	N	L	P	G	H	A	D	F	I	Q	A	A	N	S	F	L	A	D	R	M	L
Template Known Secondary structure		S	S		S	S	S	G	G	G	G													T	T							G	G	G	T	T													T	T						G	G	G	G	S	S	S	T	T									T	T	T	T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	T	D	D	R	N	P	W	E	I	A	H	E	G	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L
Query Conservation
Alig confidence											.	.	.	.	.	.	.													.
Template Conservation											.	.	.	.	.	.	.													.
Template Sequence		F	G	T	A	Y	P	M	C	P	.	.	.	.	.	.	.	L	K	E	Y	T	E	W	F	L	T	L	P	.	I	K	P	D	A	M	E	K	I	L	H	G	N	A	E	R	L	L	A	Q	A	G	R
Template Known Secondary structure						B	T	S	S		.	.	.	.	.	.	.										T	S		.											T
Template Predicted Secondary structure											.	.	.	.	.	.	.													.
Template SS confidence
		238	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions