Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 40 Aligned Residues 330 % Identity 18% Template c3hm7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:allantoinase; PDBTitle: crystal structure of allantoinase from bacillus halodurans c-125 Resolution 2.60 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.
Predicted Secondary structure																																									.																																	.	.	.	.
Query SS confidence																																									.																																	.	.	.	.
Query Sequence		V	A	D	Y	I	I	D	N	V	S	I	L	D	L	I	N	G	G	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	E	Y	T	.	D	A	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I	E	S	S	M	M	T	.	.	.	.	P	V	T	F
Query Conservation																																									.																																	.	.	.	.
Alig confidence																		.	.																						.																																	.	.	.	.
Template Conservation																		.	.
Template Sequence		R	F	D	L	I	I	R	S	S	T	V	V	T	E	T	T	.	.	T	Y	R	A	D	V	A	I	R	N	G	I	V	S	A	I	T	E	P	G	S	I	S	S	D	D	G	P	A	I	D	G	T	G	L	H	L	F	P	G	M	V	D	V	H	V	H	F	N	E	P	G	R	T	E	W	E	G	F	A	S	G
Template Known Secondary structure				S											S	S		.	.										T	T							S	T	T		S		T	T	S	S						T	T																T	T	T	S	G	G	G			S
Template Predicted Secondary structure																		.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	.	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G
Query Conservation																										.
Alig confidence																										.																												.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.
Template Sequence		S	K	S	L	A	A	G	G	V	T	T	Y	F	D	M	P	L	N	S	N	P	P	T	I	T	R	E	E	L	D	K	K	R	Q	L	A	N	E	K	S	L	V	D	Y	R	F	W	G	G	L	V	P	.	.	.	.	.	.	.	.	G	N	I	D	H	L	Q	D	L	H	D	G	G	V	I	G	F	K	A	F
Template Known Secondary structure							T	T	T								S	S	S	S	S	S		S		S									T							S	S										T	.	.	.	.	.	.	.	.	T		G	G	G							T	T		S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.														.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	.	.	H	L	T	L	D	G	H	C	P	G	L	G	G	K	E	L	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	T	A	G	I	E	N	C	H	E	S	Y	Q	L	E	E	G	R	R	K	L
Query Conservation																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	S	E	C	G	T	D	D	F	Q	F	S	H	D	E	T	L	L	K	G	M	K	K	I	A	A	L	G	S	I	L	A	V	H	A	E	S	N	E	M	V	N	A	L	T	T	I	A	I	E	E	Q	R	L	T	V	K	D	Y	S	E	A	R	P	I	V	S	E	L	E	A	V	E	R	I	L	R	F	A	Q
Template Known Secondary structure		S	S	S		S	S	S	S	S																			T																							T	T			S								S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.																																															.	.	.	.	.	280	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	P	Q	C	M	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	C	C	P	I	H	I	C	H	V	S	S	R	K	V	L	K	R	I	K	Q	A	K	G	E	G	V	N	V	S	V	E	T	C	P	H	Y	L	L	F	S	L	D	E	F	A	E	I	G	Y	L	A	K	C	A	P	P	L	R	E	R	Q	E	V	E	D	L	W	D	G	L	M	A	G	E	I	D	L	I
Template Known Secondary structure				T																							T	T																								S	T	T			S	S																		T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.																.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Query Sequence		C	T	D	D	R	N	P	W	E	I	A	H	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	.	G	L	L	A	P	G	K	Q	A	D	I	V	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.
Template Conservation
Template Sequence		S	S	D	H	S	P	S	L	P	Q	M	K	T	G	K	T	I	F	E	V	W	G	G	I	A	G	C	Q	N	T	L	A	V	M	L	T	E	G	Y	H	K	R	K	M	P	L	T	Q	I	V	Q	L	L	S	T	E	P	A	K	R	F	G	L	Y	P	Q	K	G	T	I	Q	V	G	A	E	A	S	F	T	L
Template Known Secondary structure					B					G	G	G	G			S	S	T	T	T	S				B			T	T	T									T	T	T	T	T												T								T		T	T	T	S	S			S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		346	.																				.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Query Sequence		L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	R	K	V	T	.	.	.	.	V	Q	Q	V	L	V	K	G	E	P	I	D	A	Q	T
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation
Template Sequence		I	D	L	N	E	S	Y	T	L	N	A	S	D	L	Y	Y	R	H	P	I	S	P	Y	V	G	Q	R	F	R	G	K	V	K	H	T	I	C	Q	G	K	H	V	Y	Q	D	H
Template Known Secondary structure												G	G	G			S	S	S				T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.