Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 24 Aligned Residues 326 % Identity 15% Template c3gnhA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:l-lysine, l-arginine carboxypeptidase cc2672; PDBTitle: crystal structure of l-lysine, l-arginine carboxypeptidase cc2672 from2 caulobacter crescentus cb15 complexed with n-methyl phosphonate3 derivative of l-arginine. Resolution 1.70 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																						.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																						.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	I	D	N	V	S	I	L	D	L	I	N	G	G	.	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	E	Y	T	.	D	A	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I	E	S	S	M	M	T	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																						.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																						.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	V	S	A	A	R	L	L	D	V	A	S	G	K	Y	V	D	N	P	L	V	I	V	T	D	G	R	I	T	S	I	G	K	K	G	D	A	V	P	A	G	A	T	A	V	D	L	P	G	V	T	L	L	P	G	L	I	D	M	H	V	H	L	D	S	L	A	E	V	G	G	Y	N	S	L	E	Y	S	D
Template Known Secondary structure												T	T	T	T					S							T	T								T	T	S				T	T																						T	T			T	T			S	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
								100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																																		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																																		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	V	T	F	E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	A	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.																																																																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																										.	.	.																																						.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.
Template Sequence		R	F	W	S	V	V	Q	T	A	N	A	K	K	T	L	E	A	G	F	T	T	V	R	N	V	G	A	A	D	Y	D	.	.	.	D	V	G	L	R	E	A	I	D	A	G	Y	V	P	G	P	R	I	V	T	A	A	I	S	F	G	A	T	G	G	H	C	D	S	T	F	F	P	P	S	M	D	Q	K	N	P
Template Known Secondary structure																		T	T										S	T	T		.	.	.										T	T	S	S										S			B	S	T	T	S	T	T	S			S	S		G	G	G					T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
				165	.	.	.	.	170	.	.	.	.	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	S	F	T	L	E	Q	M	L	A	W	R	D	H	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	P	G	L	G	G	K	E	L	N	A	Y	I	T	A
Query Conservation		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	S	D	S	P	D	E	A	R	K	A	V	R	T	L	K	K	Y	G	A	Q	V	I	I	C	A	T	G	G	V	F	S	R	G	N	E	P	G	Q	Q	Q	L	T	Y	E	E	M	K	A	V	V	D	E	A	H	M	A	G	I	K	V	A	A	H	A	H	G	A	S	G	I	R	E	A	V	R	A	G	V
Template Known Secondary structure		T				S														T	T		S	B			B		B			S	S	S	S	S			T	T		B		S															T	T		B							S										T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	E	N	C	H	E	S	Y	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	E	F	N	S	P	Q	C	M	L	C	T	D	D	R	N
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	I	E	H	A	S	L	V	D	D	E	G	I	K	L	A	V	Q	K	G	A	Y	F	S	M	D	I	Y	N	T	D	Y	T	Q	A	E	G	K	K	N	G	V	L	E	D	N	L	R	K	D	R	D	I	G	E	L	Q	R	E	N	F	R	K	A	L	K	A	G	V	K	M	V	Y	G	T	D	A	G	I
Template Known Secondary structure		S						T	T													T								S	T												T																											T									B	T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.					.	.	.	.	.	.	.	360
Predicted Secondary structure																																														.																	.	.						.	.	.	.
Query SS confidence																																														.																	.	.						.	.	.	.
Query Sequence		P	W	E	I	A	H	E	G	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	.	L	G	L	L	A	P	G	K	Q	A	D	I	V	L	L	S	.	.	D	A	R	K	V	.	.	.	.	T	V	Q	Q	V	L	V	K
Query Conservation																																														.																	.	.						.	.	.	.
Alig confidence				.	.	.	.																.																							.																	.	.						.	.	.	.
Template Conservation				.	.	.	.																.
Template Sequence		Y	P	.	.	.	.	H	G	D	N	A	K	Q	F	A	V	M	V	R	Y	G	.	A	T	P	L	Q	A	I	Q	S	A	T	L	T	A	A	E	A	L	G	R	S	K	D	V	G	Q	V	A	V	G	R	Y	G	D	M	I	A	V	A	G	D	P	L	A	D	V	T	T	L	E	K	P	V	F	V	M	K	G
Template Known Secondary structure		B		.	.	.	.	T	T		G	G	G								T	T	.										T	T								T		T	T	T	S	S	S			T	T	S	B							S	S		T	T	T		G	G	G	G	G	S		S					T
Template Predicted Secondary structure				.	.	.	.																.
Template SS confidence
		348	.					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		361	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	P	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	V	V	K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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