Return to main results Retrieve Phyre Job Id

Job DescriptionP31441
Confidence100.00%DateThu Jan 5 11:47:32 GMT 2012
Rank49Aligned Residues332
% Identity15%Templatec3e0lB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:guanine deaminase; PDBTitle: computationally designed ammelide deaminase
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40...... ...50...... ...60........ .70.........80.........90.....
Predicted Secondary structure 









...
.






.........

















Query SS confidence 

















. . .









.











. . . . . . . . .


























Query Sequence  VADYIIDNVSILDLINGG. . . EISGPIVIKG. RYIAGVGAEYTD. . . . . . . . . APALQRIDARGATAVPGFIDAHLHIES
Query Conservation   







 



    ...
   

 
 
.


  

     .........     



 
  
 




 
 


 
Alig confidence 

















...









.











.........


























Template Conservation 
   
  
  
         

    
 
 
 
 
  

                   
    
  
 

 

 
 
   
Template Sequence  PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ
Template Known Secondary structure 

STT
TTSBGGGTT

GGG


TT

GGG
Template Predicted Secondary structure 











































Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   96... 100.........110.........120.........130.........140...
Predicted Secondary structure 



................................


















Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .











































Query Sequence  SMMT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQ
Query Conservation 
  
................................
   
   
  





 
  
 
 
 
  

   
        
Alig confidence 



................................



















.....


















Template Conservation                                                 




    .....                   
Template Sequence  YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFA. . . . . TIHTDSSLLLADITDKFGQ
Template Known Secondary structure  GGGTTS


S
TGGGSTTT
.....
S
T
Template Predicted Secondary structure 

























.....





Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140... ......150.........160..
 
   144..... 150.........160.........170.........180.........190.........200.........210........
Predicted Secondary structure 

.....





































Query SS confidence 





. . . . .




































































Query Sequence  NQYLQV. . . . . SSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGL
Query Conservation        ..... 
  
     
                   
  
 

     
       
  

      
 

    
Alig confidence 





.....




































































Template Conservation                                                                   
              
Template Sequence  RAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPGNGVSETLMGELGNIAKTRDLHIQSHISEN
Template Known Secondary structure 

S

SSSTTS


TT

SS
SS

TT
S
S
Template Predicted Secondary structure 
































Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   219220.........230 .........240....... ..250.........260.........270... .....
Predicted Secondary structure 


..................




.











.



Query SS confidence 











. . . . . . . . . . . . . . . . . .
















.

























.




Query Sequence  GGKELNAYITAG. . . . . . . . . . . . . . . . . . IENCHESYQLEEGRRKL. QLGMSLMIREGSAARNLNALAPLINE. FNSPQ
Query Conservation      
      
..................
   
      
  
 
.  
  
     
       
   
  .     
Alig confidence 











..................
















.

























.




Template Conservation                                                           
                   
  
Template Sequence  RDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKHEVK
Template Known Secondary structure  STTSSSTTT

STT
TT

T

TT




TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   243......250.........260.........270.........280.........290.........300.........310.........320..
 
   279280.........290.........300...... ...310.........320.........330.. .......340.........350
Predicted Secondary structure 












.......









.













Query SS confidence 



























. . . . . . .

























.

















Query Sequence  CMLCTDDRNPWEIAHEGHIDALIRRLIE. . . . . . . QHNVPLHVAYRVASWSTARHFGLNHL. GLLAPGKQADIVLLSDAR
Query Conservation 
 
 

      
   
 
   

 

 ....... 
  
   

  

 


  


 
 .






 






 
 
Alig confidence 



























.......

























.

















Template Conservation    



               
                

  


   
 


   

    
 
  
  




 
   
Template Sequence  IGLGTDVAGGYSYSMLDAIRRAVMVSNILLINKVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEFDAILINPKA
Template Known Secondary structure 


TTTS



TTSSSS


TTT
TTTSSS

TTSB


TT
Template Predicted Secondary structure 





























Template SS confidence 















































































   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   351. .......360.....
Predicted Secondary structure 

.............................


Query SS confidence 

. . . . . . . . . . . . . . . . . . . . . . . . . . . . .












Query Sequence  KV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . TVQQVLVKGEPID
Query Conservation    ............................. 
  
   
  
 
Alig confidence 

.............................












Template Conservation                                  
  
 
 
  
 
Template Sequence  SDSPIDLFYGDFFGDISEAVIQKFLYLGDDRNIEEVYVGGKQVV
Template Known Secondary structure  TT
S



TTSSSS
GGGT

GGGTT
Template Predicted Secondary structure 





















Template SS confidence 











































   403......410.........420.........430.........440......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions