Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 42 Aligned Residues 332 % Identity 20% Template c2z00A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of dihydroorotase from thermus thermophilus Resolution 2.42 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		Y	I	I	D	N	V	S	I	L	D	L	I	N	G	G	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	E	Y	T	D	A	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I	E	S	S	M	M	T	.	.	.	.	P	V	T	F	E	T	A	T
Query Conservation																																																																						.	.	.	.
Alig confidence													.																						.	.	.	.																																.	.	.	.
Template Conservation													.																						.	.	.	.
Template Sequence		I	L	I	R	N	V	R	L	V	D	A	.	R	G	E	R	G	P	A	D	V	L	I	G	E	G	R	I	L	S	L	E	G	.	.	.	.	G	E	A	K	Q	V	V	D	G	T	G	C	F	L	A	P	G	F	L	D	L	H	A	H	L	R	E	P	G	E	E	V	K	E	D	L	F	S	G	L	L	A	A
Template Known Secondary structure												T	.	T												T	T					S	B		.	.	.	.				S						T	T																T	T	T		T	T	T
Template Predicted Secondary structure													.																						.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																		.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	G	A	S	F	T	L	E	Q
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	G	G	Y	T	D	L	V	S	X	P	N	T	K	P	P	V	D	T	P	E	A	V	R	A	L	K	E	K	A	K	A	L	G	L	A	R	L	H	P	A	A	A	L	T	E	K	Q	E	G	K	T	L	T	P	A	G	L	L	R	E	A	G	A	V	L	L	T	D	D	G	R	T	N	E	D	A	G	V
Template Known Secondary structure				T	T								S		S	S	S		S		S															T	S	S								S	B	G	G	G		S	S	S	B										T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																															.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Query Sequence		M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	P	G	L	G	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		L	A	A	G	L	L	X	A	A	P	L	G	L	P	V	A	V	H	A	E	D	A	G	L	R	R	N	G	V	X	N	D	G	P	L	A	D	L	L	G	L	P	G	N	P	P	E	A	E	A	A	R	I	A	R	D	L	E	V	L	R	Y	A	L	R	R	S	P	A	T	P	R	L	H	V	Q	H	L	S	T
Template Known Secondary structure										G	G	G	T														T	T		S				S							T																												S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.																																																							.	.
Query SS confidence		.	.	.																																																							.	.
Query Sequence		.	.	.	G	K	E	L	N	A	Y	I	T	A	G	I	E	N	C	H	E	S	Y	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	.	.	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I	A	H	E
Query Conservation		.	.	.																																																							.	.
Alig confidence		.	.	.																																																							.	.
Template Conservation
Template Sequence		K	R	G	L	E	L	V	R	E	A	K	R	A	G	L	P	V	T	A	E	A	T	P	H	H	L	T	L	T	E	E	A	L	R	T	F	D	P	L	F	K	V	A	P	P	L	R	G	E	E	D	R	E	A	L	L	E	G	L	L	D	G	T	L	D	A	I	A	T	D	H	A	P	H	T	L	A	E	K	E
Template Known Secondary structure														T	T																G	G	G	G	G	G			G	G	G			S	S																		T	S	S							B					T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		295															.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	G	L	L	A	P	G	K	Q	A	D	I	V	L	L	S	D	A	R	.	.	.	.	.	.	.	.	.	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.
Template Sequence		K	D	L	L	R	A	P	F	G	I	P	S	L	E	V	A	F	P	L	L	Y	T	E	L	H	L	K	R	G	F	P	L	Q	R	L	V	E	L	F	T	D	G	P	R	R	V	L	G	L	P	P	.	L	H	L	E	E	G	A	E	A	S	L	V	L	L	S	P	K	E	R	P	V	D	P	S	A	F	A	S
Template Known Secondary structure		S		T	T	T	S				B			T	T	T									T																T								T				.			S	S	T	T	S	B															G	G	G		S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
														351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	K	V	T	V	Q	Q	V	L	V	K	G	E	P	I	D	A	Q	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	R	Y	S	P	W	A	G	W	V	L	G	G	W	P	V	L	T	L	V	A	G	R	I	V	H	E	A	L	K
Template Known Secondary structure		S					T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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