Job Description P31441 Confidence 95.03% Date Thu Jan 5 11:47:32 GMT 2012 Rank 159 Aligned Residues 211 % Identity 12% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		88	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																											.	.	.	.															.	.	.
Query SS confidence									.	.																											.	.	.	.															.	.	.
Query Sequence		D	A	H	L	H	I	E	.	.	S	S	M	M	T	P	V	T	F	E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	.	.	.	.	E	I	V	N	V	M	G	E	A	G	F	A	W	F	.	.	.	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G
Query Conservation									.	.																											.	.	.	.															.	.	.
Alig confidence									.	.																											.	.	.	.															.	.	.
Template Conservation
Template Sequence		M	I	H	T	H	S	T	W	S	D	G	G	A	S	I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R	E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	G	S
Template Known Secondary structure								T	T	T	T		S	S												T	T		S								B	T	T		G	G	G	T		B																		T	T											B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	P	G	L	G	G	K	E	L	N	A	Y	I	T	A	G	I	E	N	C	H	E	S	Y
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template Sequence		L	D	F	P	D	.	.	.	.	.	.	.	.	.	D	V	L	G	E	L	D	Y	V	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q	T	E	R	L	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L	.	.	.	.	.	.	.	.	.	L	L	R	R	P	G	Y	A	L	D
Template Known Secondary structure		B	S	S			.	.	.	.	.	.	.	.	.				T	T	S	S								S		T	T	S														T		S	S						S	T	T			B	.	.	.	.	.	.	.	.	.	T	T	T	B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		410	.	.	.	.										.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.										.	.	.	.	.	.	.	.	470	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I	A	H	E	G	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V
Query Conservation
Alig confidence																																						.																			.	.	.													.
Template Conservation																																						.																			.	.	.													.
Template Sequence		L	D	A	V	L	G	A	C	E	A	N	G	T	V	V	E	I	N	A	N	A	A	R	L	D	L	D	W	R	E	A	L	R	W	R	E	.	R	L	K	F	A	I	N	T	D	A	H	V	P	G	G	L	R	D	.	.	.	A	R	Y	G	V	M	Q	A	R	K	A	G	.	L	T	P	A	H	V	V	N	S
Template Known Secondary structure													T								S	T	T	T		B	S									T	T	.	T										S	S	G	G	G	G	G	G	.	.	.											T	T	.			G	G	G	B	G	G	G
Template Predicted Secondary structure																																						.																			.	.	.													.
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.		.	.	540	.	.	.	.	.	.
		319	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		547	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions