Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 2 Aligned Residues 334 % Identity 15% Template c2aqoB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:isoaspartyl dipeptidase; PDBTitle: crystal structure of e. coli isoaspartyl dipeptidase mutant e77q Resolution 1.95 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.
Predicted Secondary structure																																									.	.																											.	.	.	.	.	.	.
Query SS confidence																																									.	.																											.	.	.	.	.	.	.
Query Sequence		V	A	D	Y	I	I	D	N	V	S	I	L	D	L	I	N	G	G	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	E	Y	T	.	.	D	A	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I	.	.	.	.	.	.	.	E	S	S	M	M	T
Query Conservation																																									.	.																											.	.	.	.	.	.	.
Alig confidence																.	.																								.	.																											.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		A	G	F	T	L	L	Q	G	A	H	L	Y	A	P	.	.	E	D	R	G	I	C	D	V	L	V	A	N	G	K	I	I	A	V	A	S	N	I	P	S	D	I	V	P	N	C	T	V	V	D	L	S	G	Q	I	L	C	P	G	F	I	D	Q	H	V	H	L	I	G	G	G	G	Q	A	G	P	T	T	R	T
Template Known Secondary structure		G							S					S	S	.	.	S											T	T							S	S			T	T	S	S	S	S							T	T	S													T	T			B		T	T		G	G	G	B
Template Predicted Secondary structure																.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	F	E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.
Template Sequence		P	E	V	A	L	S	R	L	T	E	A	G	V	T	S	V	V	G	L	L	G	T	D	S	I	S	R	H	P	E	S	L	L	A	K	T	R	A	L	N	E	E	G	I	S	A	W	M	L	T	G	A	.	.	.	.	.	.	.	Y	H	V	P	S	R	T	I	T	G	S	V	E	K	D	V	A	I	I	D	R
Template Known Secondary structure												T	T										S			S	S																	T	S									.	.	.	.	.	.	.	S	S	S	S				S	S	S										T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																													.	.	.	.	.	.	.	.															.	.											.	.	.	.	.	.											.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.															.	.											.	.	.	.	.	.											.	.	.
Query Sequence		V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	.	.	.	.	.	.	.	.	R	H	L	T	L	D	G	H	C	P	G	L	G	G	.	.	K	E	L	N	A	Y	I	T	A	G	.	.	.	.	.	.	I	E	N	C	H	E	S	Y	Q	L	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.															.	.											.	.	.	.	.	.											.	.	.
Alig confidence																													.	.	.	.	.	.	.	.															.	.											.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		V	I	G	V	C	A	I	S	D	H	R	S	A	A	P	D	V	Y	H	L	A	N	M	A	A	E	S	R	V	G	G	L	L	G	G	K	P	G	V	T	V	F	H	M	G	D	S	K	K	A	L	Q	P	I	Y	D	L	L	E	N	C	D	V	P	I	S	K	L	L	P	T	H	V	N	R	N	V	P	L	F
Template Known Secondary structure									S	S	T	T	S																							T	S			B							S		T	T	T	T								T	T					G	G	G						T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	.	.	.	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I	A	H	E	G	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.																					.	.
Template Conservation																																																										.	.
Template Sequence		E	Q	A	L	E	F	A	R	K	G	G	T	I	D	I	T	S	S	I	D	E	P	V	A	P	A	E	G	I	A	R	A	V	Q	A	G	I	P	L	A	R	V	T	L	S	S	D	G	N	G	S	V	A	G	F	E	.	.	T	L	L	E	T	V	Q	V	L	V	K	D	Y	D	F	S	I	S	D	A	L	R
Template Known Secondary structure										T	T							T	T			S	S	S												T	T			G	G	G							B	T						S		.	.																						G
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	G	L	L	A	P	G	K	Q	A	D	I	V	L	L	S	D	A	R	K	V	T	V	Q	Q	V	L	V	K	G	E	P	I	D	A	Q	T	L	Q	A	E	E	S	A
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		P	L	T	S	S	V	A	G	F	L	N	L	T	G	K	G	E	I	L	P	G	N	D	A	D	L	L	V	M	T	.	.	P	E	L	R	I	E	Q	V	Y	A	R	G	K	L	M	V	K	D	G	K	A	C	V	K	G	T
Template Known Secondary structure		G	G	T							T	T		T	T		S	S			T	T	S	B								.	.	T	T									T	T						T	T			S	S			T
Template Predicted Secondary structure																																.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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