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Job DescriptionP31441
Confidence100.00%DateThu Jan 5 11:47:32 GMT 2012
Rank33Aligned Residues331
% Identity21%Templatec1nfgA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:d-hydantoinase; PDBTitle: structure of d-hydantoinase
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90........ .100....
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Query Sequence  DYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYTDAPALQRIDARGATAVPGFIDAHLHIESSMM. . . . . . TPVTFE
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Template Sequence  DIIIKNGTIVTA. . DGISRADLGIKDGKITQIGGALG. . PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATAT
Template Known Secondary structure 
T..TTTSS


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TT



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   2.......10... ......20.........30...... ...40.........50.........60.........70.......
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLA
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Template Sequence  VAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTD. . . . . . . . . SVIEELEVLPDLGITSFV
Template Known Secondary structure  TT

TTS
TTT
SS
SS

.........TTTGGGGT

B

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   78.80.........90.........100.........110.........120.........130 .........140........
 
   185....190.........200....... ..210..... ....220.........
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Query Sequence  EMMDYPGVISGQNALLDKLDAFR. . HLTLDGHC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PGLGGKELNAYITA
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Template Conservation                                                                                  
Template Sequence  FMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIV
Template Known Secondary structure  BSSSTTTTB

T
BB


TT

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   150.........160.........170.........180.........190.........200.........210.........220.........
 
   230.........240........ .250.........260.........270.........
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Query Sequence  GIENCHESYQLEEGRRKLQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGMSLMIREGSAARNLNALAPLINEFNSPQC
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Template Sequence  NAPIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALRN. GVFE
Template Known Secondary structure  T





ST


GGGGT

GGGGG
TTTGGGGG

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T.T

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   230.........240.........250.........260.........270.........280.........290.........300.... ....
 
   280....... ..290.........300.........310.........320.........330 .........340.
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Query Sequence  MLCTDDRN. . . . . . . . . . . . . . . . . PWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLN. HLGLLAPGKQA
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Template Sequence  TVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQGVNEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDA
Template Known Secondary structure 


B



TTTTTTTTTT
GGGS


B

TTTTTSS
TTT
TTTSSS
STTSB
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   309310.........320.........330.........340.........350.........360.........370.........380........
 
   342.......350.. .......360.........370.....
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Query Sequence  DIVLLSDARKV. . . . . . . . . . . . . . . . . . . . . . . TVQQVLVKGEPIDAQTLQAEESA
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Template Sequence  DIVLWDPEAEMVIEQTAMHNAMDYSSYEGHKVKGVPKTVLLRGKVIVDEGSYVGEPT
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GGGS
SS
S

TTTT
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TT
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   389390.........400.........410.........420.........430.........440.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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