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Job DescriptionP31441
Confidence100.00%DateThu Jan 5 11:47:32 GMT 2012
Rank31Aligned Residues345
% Identity20%Templatec1k1dF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:d-hydantoinase; PDBTitle: crystal structure of d-hydantoinase
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90........ .100....
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Query Sequence  DYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYTDAPALQRIDARGATAVPGFIDAHLHIESSMM. . . . . . TPVTFE
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Template Sequence  TKIIKNGTIVTATD. . TYEAHLLIKDGKIAMIGQNLE. EKGAEVIDAKGCYVFPGGIDPHTHLDMPLGGTVTKDDFESGT
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SS
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SSBSS

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TT


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SS
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   2.......10..... ....20.........30...... ...40.........50.........60.........70........
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLA
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Template Sequence  IAAAFGGTTTIIDFCLTNKGEPLKKAIETWHNKANGKAVIDYGFHLMISEITDD. . . . . . . . VLEELPKVLEEEGITSLV
Template Known Secondary structure  TT


TTS
TTT
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   7980.........90.........100.........110.........120.........130.. .......140.........150
 
   185....190.........200....... ..210.....
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Query Sequence  EMMDYPGVISGQNALLDKLDAFR. . HLTLDGHC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FMAYKNVFQADDGTLYCTLLAAKELGALVMVHAENGDVIDYLTKKALADGNTDPIYHALTRPPELEGEATGRACQLTELA
Template Known Secondary structure  BSSSTTTTB

T
BB


TT

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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   216...220.........230........ .240.........250.........260.........270.........
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Query Sequence  . . . . . . . . . . PGLGGKELNAYITAGIENCHESY. . . . . . QLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQC
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Template Conservation                   
      
         
                      
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Template Sequence  GSQLYVVHVTCAQAVEKIAEARNKGLDVWGETCPQYLVLDQSYLEKPNFEGAKYVWSPPLREKWHQEVLWNALKN. GQLQ
Template Known Secondary structure  T

S

STT



GGGGTSSTTGGGGG

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   232.......240.........250.........260.........270.........280.........290.........300...... ...310
 
   280.........290..... ....300.........310.........320.........330.. .......340
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Query Sequence  MLCTDDRNPWEIAHEG. . . . . . . . . . . . . . . . . . HIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHL. GLLAPGKQ
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Template Sequence  TLGSDQCSFDFKGQKELGRGDFTKIPNGGPIIEDRVSILFSEGVKKGRITLNQFVDIVSTRIAKLFGLFPKKGTIVVGSD
Template Known Secondary structure 


B



TTTTGGGGSS
GGGS


B

TTTTGGGTSS
TTT
TTTSS

STTSB
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   311........320.........330.........340.........350.........360.........370.........380.........390
 
   341...... ..350.. .......360.........370.........380.......
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Query Sequence  ADIVLLS. . . . . . . DARKV. . . . . . . . . . . . . . . . TVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNT
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Template Sequence  ADLVIFDPNIERVISAETHHMAVDYNAFEGMKVTGEPVSVLCRGEFVVRDKQFVGKPGYGQYLKRAKYGT
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TTT

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TTTT
TTTT


TT
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S

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   391........400.........410.........420.........430.........440.........450.........460
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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