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Job DescriptionP31441
Confidence100.00%DateThu Jan 5 11:47:32 GMT 2012
Rank21Aligned Residues336
% Identity20%Templatec1gkrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:non-atp dependent l-selective hydantoinase; PDBTitle: l-hydantoinase (dihydropyrimidinase) from arthrobacter2 aurescens
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90........ .100.....
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Query Sequence  DYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYTDAPALQRIDARGATAVPGFIDAHLHIESSMM. . . . . TPVTFET
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Template Sequence  DVIVKNCRLVSS. . DGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRYGRFELDSE
Template Known Secondary structure  T..TTTS

TT


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GGGTTTS

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   3......10.... .....20.........30.........40.........50.........60.........70.........80
 
   106...110.........120.........130.........140.........150.........160.........170.........180.....
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Query Sequence  ATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLAE
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Template Sequence  SAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGNL. . . . . . . PEIRKMHDAGAVGFSMMAASV
Template Known Secondary structure  T
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SSB



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B

BSS
SB
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   81........90.........100.........110.........120.........130.. .......140.........150...
 
   186...190.........200.........210..... ....220.........230..
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Query Sequence  MMDYPGVISGQNALLDKLDAFRHLTLDGHC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PGLGGKELNAYITAGIE
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Template Sequence  PGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCR
Template Known Secondary structure  TTTB
B

T
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   155....160.........170.........180.........190.........200.........210.........220.........230....
 
   233......240....... ..250..... ....260.........270... ......280......
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Query Sequence  NCHESYQLEEGRRKL. . . . QLGMSLMI. . . . . . . . . . . . . . . . . . . . . REGSAARNLNALAPLINE. FNSPQCMLCTDDR
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Template Sequence  LIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHG
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STT


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GGGGGGG

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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   287..290..... ....300.........310.........320.........330.. .......340........
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Query Sequence  NPWEIAHEG. . . . . . . . . . . . . . . . . HIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHL. GLLAPGKQADIVLLSD
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Template Sequence  GHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDADLLILDL
Template Known Secondary structure 


GGGTGGGGT
GGGS


B

TTTTGGGTSS
TT
TTTSSS

TTSB

S
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   349350... ......360.........370.....
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Query Sequence  ARKVT. . . . . . . . . . . . . . . . . . . . . . . VQQVLVKGEPIDAQTLQAEESA
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Template Sequence  DIDTKVDASQFRSLHKYSPFDGMPVTGAPVLTMVRGTVVAEKGEVLVEQG
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GGG
SSS



TTTT


TTTT
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   395....400.........410.........420.........430.........440....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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