Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 19 Aligned Residues 348 % Identity 18% Template c1fwcC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:urease; PDBTitle: klebsiella aerogenes urease, c319a variant at ph 8.5 Resolution 2.00 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	G	D	A	V	A	D	Y	I	I	D	N	V	S	I	L	D	L	I	N	G	G	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	.	.	.	.	.	.	.	.	.	.	E	Y	T	D	A	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I
Query Conservation																																											.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		M	L	A	A	D	C	V	D	L	V	L	T	N	A	L	I	V	D	H	W	G	.	.	I	V	K	A	D	I	G	V	K	D	G	R	I	F	A	I	G	K	A	G	N	P	D	I	Q	P	N	V	T	I	P	I	G	A	A	T	E	V	I	A	A	E	G	K	I	V	T	A	G	G	I	D	T	H	I	H	W
Template Known Secondary structure				G	G	G	S		S											T	T		.	.										T	T											T	T	T		S	S							T	T							T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.												.	.	.	.	160
Predicted Secondary structure																.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	S	M	M	T	P	V	T	F	E	T	A	T	.	.	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	.	.	.	.	.	.	.	.	.	.	.	L	E	G	C	D
Query Conservation																.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	C	P	Q	Q	A	E	E	A	L	V	S	G	V	T	T	M	V	G	G	G	T	G	P	A	A	G	T	H	A	T	T	C	T	P	G	P	W	Y	I	S	R	M	L	Q	A	A	D	S	L	P	V	N	I	G	L	L	G	K	G	N	V	S	Q	P	D	A	L	R	E	Q	V	A	A	G	V	I	G	L	I
Template Known Secondary structure		S		T										T										S	S																								T	T	S	S	S					B						S												T		S	B
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	E	D	W	G	A	T	P	A	A	I	D	C	A	L	T	V	A	D	E	M	D	I	Q	V	A	L	H	S	D	T	L	N	E	S	G	F	V	E	D	T	L	A	A	I	G	G	R	T	I	H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	T	A	C	A	H	P	N	I	L	P	S	S	T
Template Known Secondary structure		B	G	G	G																		T		B				B			T	T		S	S											T	T						T	T	T	T	S	T	T	S	S	S	T	T	T	G	G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
					216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	P	G	L	G	G	K	E	L	N	A	Y	I	T	A	G	I	E	N	C	H	E	S	Y	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I	A
Query Conservation		.	.	.
Alig confidence		.	.	.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	T	L	P	Y	T	L	N	T	I	D	E	H	L	D	M	L	M	V	A	H	H	L	D	P	D	I	A	E	D	V	A	F	A	E	S	R	I	.	.	.	.	.	.	.	.	.	.	R	R	E	T	I	A	A	E	D	V	L	H	D	L	G	A	F	S	L	T	S	S	D	S	Q	A	M	G	R	V	G
Template Known Secondary structure		S	T	T	S	S		B	T	T														T			T	T	S									T	T		.	.	.	.	.	.	.	.	.	.														T	T	S	S							T	T	S	S	S		T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.											.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.													.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																											.																.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.																											.																.
Query Sequence		H	E	G	H	I	D	A	L	I	R	R	L	I	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	.	G	L	L	A	P	G	K	Q	A	D	I	V	L	L	S	.	D	A	R	K	V	T	V	Q	Q	V	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.																											.																.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																											.																.
Template Conservation
Template Sequence		E	V	I	L	R	T	W	Q	V	A	H	R	M	K	V	Q	R	G	A	L	A	E	E	T	G	D	N	D	N	F	R	V	K	R	Y	I	A	K	Y	T	I	N	P	A	L	T	H	G	I	A	H	E	V	G	S	I	E	V	G	K	L	A	D	L	V	V	W	S	P	A	F	F	G	V	K	P	A	T	V	I
Template Known Secondary structure																				S		T	T			S	S	S											T	T	T							T	T		T	T	T	S	S	S	S		T	T	S	B								G	G	G	T	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		359	360	.	.	.	.						.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		V	K	G	E	P	I	.	.	.	.	.	D	A	Q	T	L	Q	A	E	E	S	A	R	L	A	Q	S	A	P	P
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.
Template Conservation
Template Sequence		K	G	G	M	I	A	I	A	P	M	G	D	I	N	A	S	I	P	T	P	Q	P	V	H	Y	R	P	M	F	G
Template Known Secondary structure			T	T										T	T	S	S	S	S		S	S								G	G
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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