|   |
30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
. | . | . | . | . | . | . | 70 | . | . | . | |
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. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
| . | . |
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|
|  |  |  |  |  |
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|  |  |  |
|  |  | . | . |  |  |  |  |  |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|  |  |  |
|
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|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
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| . |
. |
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
E | R | Q | L | N | P | W | F | T | . |
. |
K | M | Y | G | F | H | L | L | K | I | G | N | L | S | A | E | I | N | C | E | A | C | A | V | . |
. |
S | H | Q | V | N | V | S | A | Q | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | Q | V | Q | A | D | P | L | H | L | P | F | A | D | K |
Query Conservation |   |
  |   |   |
|   |   |   |
|   | . | . |   |   |   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
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|
|
|
| . | . |
|
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|
| . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | C | L | V | E | Q | A | L | A | R | L | P | E | Q | P | C | R | I | L | D | L | G | T | G | T | G | A | I | A | L | A | L | A | S | E | R | P | D | C | E | I | I | A | V | D | R | M | P | D | A | V | S | L | A | Q | R | N | A | Q | H | L | A | I | K | N | I | H | I | L | Q | S | D | W | F | S | A | L | A | G | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S |
| S | S |
|
|  |  |  |  |  | T |
| T | T | S |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |
|
| S | T | T | G | G | G | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
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|
Template SS confidence |   |
|
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  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
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. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
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|
Query Sequence |   |
S | V | D | V | C | L | L | A | H | T | L | P | W | C | T | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | R | L | L | R | E | A | D | R | V | L | I | D | D | G | W | L | V | I | S | G | F | N | P | I | S | F | M | G | L | R | K | L | V | P | V | L | R |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
Q | F | A | M | I | V | S | N | P | P | Y | I | D | E | Q | D | P | H | L | Q | Q | G | D | V | R | F | E | P | L | T | A | L | V | A | A | D | S | G | M | A | D | I | V | H | I | I | E | Q | S | R | N | A | L | V | S | G | G | F | L | L | L | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
| B |
| T | T |
|  |  |  |  | S | S | G | G | G | S | S |
| S | T | T | T | B |
|  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | S | P | Y | N | S | R | M | F | T | L | M | R | Q | L | D | W | L | S | L | L | N | F | E | V | L | H | A | S | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
H | G | W | Q | Q | G | E | A | V | R | Q | A | F | I | L | A | G | Y | H | D | V | E | T | C | R |
Template Known Secondary structure |   |
. | . | . | . | . | . |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
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  |   |
|
|
|
|
|
|
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
  |