 |
Job Description | P75672 | Confidence | 73.89% | Date | Thu Jan 5 12:12:51 GMT 2012 |
Rank | 310 | Aligned Residues | 77 |
% Identity | 8% | Template | c3ll7A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:putative methyltransferase; |
PDBTitle: crystal structure of putative methyltransferase pg_1098 from2 porphyromonas gingivalis w83
|
Resolution | 1.80 Å |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
P | W | G | K | L | Y | R | K | A | L | E | R | Q | L | N | P | W | F | T | K | M | Y | . |
. |
G | F | H | L | L | K | I | G | N | L | S | A | E | I | N | C | E | A | C | A | V | S | H | Q | V | N | V | S | A | Q | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | Q | V | Q |
Query Conservation |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   | . | . |
|   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
P | S | R | L | S | L | E | Q | S | S | G | A | V | T | S | S | Y | K | S | R | F | I | R | E | G | T | K | V | V | D | L | T | G | G | L | G | I | D | F | I | A | L | X | S | K | A | S | Q | G | I | Y | I | E | R | N | D | E | T | A | V | A | A | R | H | N | I | P | L | L | L | N | E | G | K | D | V | N | I | L | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  | S |
|
|  |  |  |  |  |  | G | G | G | G | S |
| T | T |
|  |  |  |  | S | S |
| S | S | S |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|  |  |  |
| . | . |
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | P | L | H | L | . |
. |
P | F | A | D | K | S | V | D | V | C | L | L |
Query Conservation |   |
  |
|   |   |   |
| . | . |
|   |   |   |   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
G | D | F | K | E | Y | L | P | L | I | K | T | F | H | P | D | Y | I | Y | V |
Template Known Secondary structure |   |
S |
| G | G | G | S |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|