Job Description P75672 Confidence 82.11% Date Thu Jan 5 12:12:51 GMT 2012 Rank 308 Aligned Residues 111 % Identity 19% Template c3lkdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of the type i restriction-modification2 system methyltransferase subunit from streptococcus3 thermophilus, northeast structural genomics consortium4 target sur80 Resolution 2.25 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																									.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	L	P	W	G	K	L	Y	R	K	A	L	E	R	Q	L	N	P	W	F	T	K	M	Y	G	F	H	L	L	K	I	G	N	L	S	A	E	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	A	C	A	V	S	H	Q	V	N	V	S	A	Q	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		F	Y	T	P	.	.	Q	P	V	A	K	L	X	T	Q	I	A	F	L	G	R	E	D	K	Q	G	F	T	L	Y	D	A	T	X	G	S	G	S	L	L	L	N	A	K	R	Y	S	R	Q	P	Q	T	V	V	Y	F	G	Q	E	L	N	T	S	T	Y	N	L	A	R	X	N	X	I	L	H	G	V	P	I	E
Template Known Secondary structure						.	.													T	T		T	T		S	S						T	T		T	T	S	T	T	G	G	G						S		G	G	G								S															T	T			G	G
Template Predicted Secondary structure						.	.
Template SS confidence
		199	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.																								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.
Predicted Secondary structure																				.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																				.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		M	P	V	Q	V	Q	A	D	P	L	H	L	P	F	A	D	K	S	.	.	.	V	D	V	C	L	L	A	H	T	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	C	T	D	P	H	R	L	L	R	E	A	D	R	V	L	I	D	.	D	G	W	L	V	I
Query Conservation																				.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																				.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		N	Q	F	L	H	N	A	D	T	L	D	E	D	W	P	T	Q	E	P	T	N	F	D	G	V	L	X	N	P	P	Y	S	A	K	W	S	A	S	S	G	F	X	D	D	P	R	F	S	P	F	G	K	L	A	P	K	S	K	A	D	F	A	F	L	L	H	G	Y	Y	H	L	K	Q	D	N	G	V	X	A	I
Template Known Secondary structure		G						S		T	T	T	S		S			S	S				B	S								B	T							G	G	G	G	G	S	T	T	T	G	G	G	S	S				T	T													T	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		126	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	P	H
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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