Job Description P75672 Confidence 99.58% Date Thu Jan 5 12:12:51 GMT 2012 Rank 64 Aligned Residues 178 % Identity 11% Template c3ggdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase (yp_325210.1)2 from anabaena variabilis atcc 29413 at 2.11 a resolution Resolution 2.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		P	A	R	V	P	Q	T	V	V	A	P	D	C	W	.	.	.	G	D	L	P	W	G	K	.	.	.	.	.	.	.	.	.	L	Y	R	K	A	L	E	R	Q	L	N	P	W	F	T	K	M	Y	G	F	H	L	L	K	I	G	N	L	S	A	E	I	N	C	E	A	C	A	V	S	H	Q	V	N	V	S	A
Query Conservation																.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	I	K	K	P	D	I	N	V	A	D	A	W	E	Q	Y	W	N	K	T	L	V	N	S	T	P	V	L	W	D	A	N	V	E	R	A	V	V	V	D	L	P	R	F	E	L	L	F	N	P	E	L	P	L	I	D	F	A	C	G	N	G	T	Q	T	K	F	L	S	Q	F	F	P	R	V	I	G	L	D
Template Known Secondary structure			S	S																						T				T	T				G	G	G	T									T	T	T	S		T	T	S						T		T	T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		71	.	.															.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																							.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																							.	.	.
Query Sequence		Q	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	Q	V	Q	A	D	P	.	.	.	.	L	H	L	P	F	A	D	K	S	V	D	V	C	L	L	A	H	T	L	P	W	C	.	.	.	T	D	P	H	R	L	L	R	E	A	D	R	V	L	I	D	D	G	W	L	V	I	S	G	F	N
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																							.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																							.	.	.
Template Conservation
Template Sequence		V	S	K	S	A	L	E	I	A	A	K	E	N	T	A	A	N	I	S	Y	R	L	L	D	G	L	V	P	E	Q	A	A	Q	I	H	S	E	I	G	D	A	N	I	Y	X	R	T	G	F	H	H	I	P	V	E	K	R	E	L	L	G	Q	S	L	R	I	L	L	G	K	Q	G	A	X	Y	L	I	E	L	G
Template Known Secondary structure		S												S			T	T								T	T														S							S	S	S	T	T	S		G	G	G													T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		P	I	S	F	M	G	L	R	K	L	V	P	V	L	R	K	T	S	P	.	.	.	.	.	.	.	Y	N	S	R	M	F	T	L	M	R	Q	L	D	W	L	S	L	L	N	F	E	V	L	H	A	S	R	F	H	V	L	P
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	C	I	D	F	F	N	S	L	L	E	K	Y	G	Q	L	P	Y	E	L	L	L	V	X	E	H	G	I	R	P	G	I	F	T	A	E	D	I	E	L	Y	F	P	D	F	E	I	L	S	Q	G	E	G	L	F	Q	S
Template Known Secondary structure		T	T													S	S										T	T	T																T	T										B
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions