Job Description P75672 Confidence 88.00% Date Thu Jan 5 12:12:51 GMT 2012 Rank 302 Aligned Residues 106 % Identity 19% Template c3evaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rna-directed rna polymerase ns5; PDBTitle: crystal structure of yellow fever virus methyltransferase complexed2 with s-adenosyl-l-homocysteine Resolution 1.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.																	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		R	Q	L	N	P	W	F	T	K	M	Y	G	F	H	L	L	K	I	G	N	L	S	A	E	I	N	C	E	A	.	.	C	A	V	S	H	Q	V	N	V	S	A	Q	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	Q	V	Q	A	.	D	P	L	H	L	P	F	A	D	K	S	V
Query Conservation																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence																															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.								.	.
Template Conservation																																																																													.	.
Template Sequence		R	W	F	H	E	R	G	Y	V	K	L	E	G	R	V	I	D	L	G	C	G	R	G	G	W	C	Y	Y	A	A	A	Q	K	E	V	S	G	V	K	G	F	T	L	G	R	D	G	H	E	K	P	M	N	V	Q	S	L	G	W	N	I	I	T	F	K	D	K	T	D	I	H	R	L	E	P	.	.	V	K	C
Template Known Secondary structure							T	T	S	S										T		T	T									T	S	T	T												T	T									B	T	T	G	G	G						S			T	T	S	S			.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.									.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		D	V	C	L	L	A	H	T	L	P	W	C	T	D	P	H	R	L	L	R	E	A	D	R	V	L	.	.	.	.	.	.	.	.	I	D	D	G	W	L	V	I	S	G	F	N	P	I	S	F	M	G	L	R	K	L
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence												.																.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		D	T	L	L	C	D	I	G	E	S	.	S	S	S	S	V	T	E	G	E	R	T	V	R	V	L	D	T	V	E	K	W	L	A	C	G	V	D	N	F	C	V	K	V	L	A	P	Y	M	P	D	V	L	E	K	L
Template Known Secondary structure		S										.		S																					T	T			S							S		T	T	S
Template Predicted Secondary structure												.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions