|   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | P | W | F | T | K | M | Y | G | F | H | L | L | K | I | G | N | L | S | A | E | I | N | C | E | A | C | A | V | S | H | Q | V | N | V | S | A | Q | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | Q | V | Q | A | D | P | L | H | L | P | F | A | D | K | S | V | D | V | C | L | L | A | H | T | L |
Query Conservation |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   | . |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
Template Sequence |   |
L | L | K | H | I | K | . |
K | E | W | K | E | V | L | D | I | G | C | S | S | G | A | L | G | A | A | I | K | E | N | G | T | R | V | S | G | I | E | A | F | P | E | A | A | E | Q | A | K | E | K | L | D | H | V | V | L | G | D | I | E | T | X | D | X | P | Y | E | E | E | Q | F | D | C | V | I | F | G | D | V | L |
Template Known Secondary structure |   |
 |  | T | T |
|
| . | T | T |
| S |  |  |  |  |  | T |
| T | T | S |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  | S |
| T | T | T |
|
|
|
| S |
| T | T |
|  |  |  |  |  |  |  | S |
| G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | W | C | T | D | P | H | R | L | L | R | E | A | D | R | V | L | I | D | D | G | W | L | V | I | S | G | F | N | P | I | S | F | M | G | L | R | K | L | V | P | . |
. |
. |
. |
. |
. |
V | L | R | K | T | S | P | Y | N | S | R | M | F | T | L | M | R | Q | L | D | W | L | S | L | L | N | F | E | V | L | H | A | S |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
E | H | L | F | D | P | W | A | V | I | E | K | V | K | P | Y | I | K | Q | N | G | V | I | L | A | S | I | P | N | V | S | H | I | S | V | L | A | P | L | L | A | G | N | W | T | Y | T | E | Y | G | L | L | D | K | T | H | I | R | F | F | T | F | N | E | X | L | R | X | F | L | K | A | G | Y | S | I | S | K | V | D |
Template Known Secondary structure |   |
G | G | S | S |
|  |  |  |  |  |  |  | T | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  | T | T |
|
|
|
| B | S | S | S | T | T | B | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |
  |   |
175 | . | . | . | . | 180 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | H | V | L | P | W | . |
. |
. |
. |
. |
N | K | H | G | G | K | L | L | N | A | H | I | . |
. |
. |
. |
. |
. |
. |
P | A | L | G | C | L | Q | L | I | V | A | R | K | R | T | I |
Query Conservation |   |
  |   |   |   |   |
|   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
Template Sequence |   |
R | V | Y | V | D | H | K | X | Y | E | P | L | I | E | E | L | Y | G | I | C | K | K | Y | R | L | G | S | G | F | X | A | E | T | V | V | F | Q | Y | I | I | E | A | E | K | S | Q | L |
Template Known Secondary structure |   |
 |  |  |
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |