Job Description P75672 Confidence 96.97% Date Thu Jan 5 12:12:51 GMT 2012 Rank 257 Aligned Residues 141 % Identity 13% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																							.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	W	G	K	L	Y	R	K	A	L	E	R	Q	L	N	P	W	F	T	K	M	.	Y	G	F	H	L	L	K	I	G	N	L	S	A	E	I	N	C	E	A	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	H	Q	V	N	V	S	A	Q	G	M	P	V
Query Conservation																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	R	M	R	V	N	R	D	L	A	V	L	G	L	E	Y	L	C	K	K	L	G	R	P	V	K	V	A	D	P	L	S	A	S	G	I	R	A	I	R	F	L	L	E	T	S	C	V	E	K	A	Y	A	N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	D	R	Y	E
Template Known Secondary structure			G	G	G																				S							S	S		T	T	T											S										S															T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure											.	.																																																					.
Query SS confidence											.	.																																																					.
Query Sequence		Q	V	Q	A	D	P	L	H	L	.	.	P	F	A	D	K	S	V	D	V	C	L	L	A	H	T	L	P	W	C	T	D	P	H	R	L	L	R	E	A	D	R	V	L	I	D	D	G	W	L	V	I	S	G	F	N	P	I	S	F	M	G	L	.	R	K	L	V	P	V	L	R	K	T	S	P	Y	N	S	R
Query Conservation											.	.																																																					.
Alig confidence											.	.											.	.	.	.																																							.
Template Conservation																							.	.	.	.
Template Sequence		I	H	G	M	E	A	N	F	F	L	R	K	E	W	G	F	G	F	D	Y	V	.	.	.	.	D	L	D	P	F	G	T	P	V	P	F	I	E	S	V	A	L	S	M	K	R	G	G	I	L	S	L	T	A	T	D	T	A	P	L	S	G	T	Y	P	K	T	C	M	R	R	Y	M	A	R	P	L	R	N	E
Template Known Secondary structure					S							T	S			S	S						.	.	.	.					S	S																														T	T	S	S										S	B				S	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	T	L	M	R	Q	L	D	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	H	E	V	G	I	R	I	L	I
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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