Job Description P75672 Confidence 91.38% Date Thu Jan 5 12:12:51 GMT 2012 Rank 300 Aligned Residues 90 % Identity 16% Template c2hwkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Resolution 2.45 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.												.	.	100
Predicted Secondary structure																																																					.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	P	W	F	T	K	M	Y	G	F	H	L	L	K	I	G	N	L	S	A	E	I	N	C	E	A	C	A	V	S	H	Q	V	N	V	S	A	Q	G	M	P	V	Q	V	Q	A	D	P	L	H	.	L	P	F	A	D	K	S	V	D	V	C	L	L	A	.	.	.	.	.	.	.	.	.	.	.	H	T	L
Query Conservation																																																					.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																												.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		F	S	S	F	V	S	K	L	K	G	R	T	V	L	V	V	G	.	.	.	.	.	.	.	E	K	L	S	V	P	G	K	M	V	D	W	L	S	D	R	P	E	A	T	F	R	A	R	L	D	L	G	I	P	G	D	V	P	K	Y	D	I	I	F	V	N	V	R	T	P	Y	K	Y	H	H	Y	Q	Q	C	E
Template Known Secondary structure								T	S	S		S							.	.	.	.	.	.	.	S					T	T	S							S	S	T	T		S					G	G	G		S		T	T	S																S
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.								.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	C	T	D	P	H	R	L	L	R	E	A	D	R	V	L	I	D	D	G	W	L	V	I	S	G	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	H	A	I	K	L	S	M	L	T	K	K	A	C	L	H	L	N	P	G	G	T	C	V	S	I	G	Y	G
Template Known Secondary structure										T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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