Job Description P32106 Confidence 96.09% Date Wed Jan 25 15:20:49 GMT 2012 Rank 36 Aligned Residues 81 % Identity 11% Template c3qkyA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane assembly lipoprotein yfio; PDBTitle: crystal structure of rhodothermus marinus bamd Resolution 2.15 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.																																						.
Query SS confidence																																							.	.	.	.	.																																						.
Query Sequence		Q	H	G	D	S	E	A	S	F	R	L	Y	Q	Y	Y	C	F	T	K	N	N	I	Y	K	Q	L	R	F	L	E	R	S	A	S	Q	G	N	.	.	.	.	.	V	T	A	Q	F	N	Y	G	V	F	L	S	D	T	N	P	T	L	S	E	Y	Y	N	L	N	R	A	I	Y	W	M	E	F	A	V	N	N	.
Query Conservation																																							.	.	.	.	.																																						.
Alig confidence																		.																					.	.	.	.	.																.	.	.	.	.	.	.																.
Template Conservation																		.																																									.	.	.	.	.	.	.
Template Sequence		R	H	S	S	P	Q	E	A	F	E	R	A	M	E	F	Y	.	N	Q	G	K	Y	D	R	A	I	E	Y	F	K	A	V	F	T	Y	G	R	T	H	E	W	A	A	D	A	Q	F	Y	L	A	R	A	Y	Y	Q	N	K	.	.	.	.	.	.	.	E	Y	L	L	A	A	S	E	Y	E	R	F	I	Q	I	Y
Template Known Secondary structure				S	S													.		T	T													G	G	G		S		S	T	T															T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																									.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
			127	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	N	I	D	A	K	S	K	L	Q	E	L	K	K	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		Q	I	D	P	R	V	P	Q	A	E	Y	E	R	A	M	C
Template Known Secondary structure		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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