Job Description P32106 Confidence 91.80% Date Wed Jan 25 15:20:49 GMT 2012 Rank 60 Aligned Residues 124 % Identity 12% Template c3mv3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 3.25 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		S	F	I	C	Q	L	H	G	A	D	V	K	I	K	Q	N	E	S	M	M	G	S	T	A	M	T	Y	D	L	S	E	E	K	L	M	K	L	K	Y	K	S	Q	H	.	.	.	.	G	D	S	E	A	S	F	R	L	Y	Q	Y	Y	C	F	T	K	N	N	I	Y	K	Q	L	R	F	L	E	R	S	A	S	Q
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.																		.
Template Conservation																																																																		.
Template Sequence		E	E	L	E	N	L	L	K	D	K	Q	N	S	P	Y	E	L	Y	L	L	A	T	A	Q	A	I	L	G	D	L	D	K	S	L	E	T	C	V	E	G	I	D	N	D	E	A	E	G	T	T	E	L	L	L	L	A	I	E	V	A	L	L	N	N	.	N	V	S	T	A	S	T	I	F	D	N	Y	T	N	A
Template Known Secondary structure							T	T	T	T	S																		T														T	T	T	T	S	S	S															T	T	.														T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		88	.	90	.											.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																				.
Query SS confidence						.	.	.	.	.	.	.	.	.	.																																				.
Query Sequence		G	N	V	T	.	.	.	.	.	.	.	.	.	.	A	Q	F	N	Y	G	V	F	L	S	D	T	N	P	T	L	S	E	Y	Y	N	L	N	R	A	I	Y	W	M	E	F	A	V	N	N	.	G	N	I	D	A	K	S	K	L	Q	E	L	K	K	L	K	R
Query Conservation						.	.	.	.	.	.	.	.	.	.																																				.
Alig confidence						.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		I	E	D	T	V	S	G	D	N	E	X	I	L	N	L	A	E	S	Y	I	K	F	A	T	N	K	E	.	.	.	.	.	.	.	T	A	T	S	N	F	Y	Y	Y	E	E	L	S	Q	T	F	P	T	W	K	T	Q	L	G	L	L	N	L	H	L	Q	Q	R
Template Known Secondary structure			T	T	T			S	S	T																	T	T	.	.	.	.	.	.	.	T	T	T													S		S														T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions