Job Description P32106 Confidence 68.43% Date Wed Jan 25 15:20:49 GMT 2012 Rank 85 Aligned Residues 111 % Identity 11% Template c3ly8A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:transcriptional activator cadc; PDBTitle: crystal structure of mutant d471e of the periplasmic domain of cadc Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																				.														.	.	.	.	.	.	.	.
Query SS confidence																																				.														.	.	.	.	.	.	.	.
Query Sequence		L	F	F	Y	F	S	F	I	C	Q	L	H	G	A	D	V	K	I	K	Q	N	E	S	M	M	G	S	T	A	M	T	Y	D	L	.	S	E	E	K	L	M	K	L	K	Y	K	S	Q	.	.	.	.	.	.	.	.	H	G	D	S	E	A	S	F	R	L	Y	Q	Y	Y	C	F	T	K	N	N	I	Y	K	Q
Query Conservation																																				.														.	.	.	.	.	.	.	.
Alig confidence																																				.														.	.	.	.	.	.	.	.																.
Template Conservation																																																																									.
Template Sequence		A	S	E	L	L	G	E	I	V	Q	S	S	P	E	F	T	Y	A	R	A	E	K	A	L	V	D	I	V	R	H	S	Q	H	P	L	D	E	K	Q	L	A	A	L	N	T	E	I	D	N	I	V	T	L	P	E	L	N	N	L	S	I	I	Y	Q	I	K	A	V	S	A	L	.	V	K	G	K	T	D	E	S
Template Known Secondary structure														T	T																			S																			T		G	G	G	T	T														.			T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	R	F	L	E	R	S	A	S	Q	G	.	N	V	T	A	Q	F	N	Y	G	V	F	L	S	D	T	N	P	T	L	S	E	Y	Y	N	L	N	R	A	I	Y	W	M	E	F	A	V	N
Query Conservation													.
Alig confidence													.																	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.
Template Sequence		Y	Q	A	I	N	T	G	I	D	L	E	M	S	W	L	N	Y	V	L	L	G	K	V	Y	E	M	K	G	.	.	.	.	.	.	.	M	N	R	E	A	A	E	A	Y	L	T	A	F	N
Template Known Secondary structure																												T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.								.	.	.	.	.	470	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions