Job Description P32106 Confidence 66.95% Date Wed Jan 25 15:20:49 GMT 2012 Rank 88 Aligned Residues 139 % Identity 4% Template c2ifuA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:gamma-snap; PDBTitle: crystal structure of a gamma-snap from danio rerio Resolution 2.60 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.
Query Sequence		L	L	F	F	Y	F	S	F	I	C	Q	L	H	G	A	D	V	K	I	K	Q	N	E	S	M	M	G	S	T	A	M	T	Y	D	L	S	E	E	K	L	M	K	L	K	Y	K	S	Q	H	.	.	.	.	.	.	.	.	G	D	S	E	A	S	F	R	L	Y	Q	Y	Y	C	F	T	K	N	N	I	Y	K	Q
Query Conservation																																																			.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.																		.
Template Conservation																																																																												.
Template Sequence		V	Q	Y	I	E	K	A	S	V	X	Y	V	E	N	G	T	P	D	T	A	A	X	A	L	D	R	A	G	K	L	X	E	P	L	D	L	S	K	A	V	H	L	Y	Q	Q	A	A	A	V	F	E	N	E	E	R	L	R	Q	A	A	E	L	I	G	K	A	S	R	L	L	V	R	Q	Q	.	K	F	D	E	A
Template Known Secondary structure														T	T	T																	T	T	T																			T	T																			T	T	.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.
		78	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		L	R	F	L	E	R	S	A	S	.	.	.	.	.	.	.	.	Q	G	N	V	T	A	Q	F	N	Y	G	V	F	L	S	D	T	N	P	T	L	S	E	Y	Y	N	L	N	R	A	I	Y	W	M	E	F	A	.	.	.	.	.	.	V	N	N	G	N	I	D	A	K	S	K	L	Q	E	L	K	K	L	K	R
Query Conservation											.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		A	A	S	L	Q	K	E	K	S	X	Y	K	E	X	E	N	Y	P	T	C	Y	K	K	C	I	A	Q	V	L	V	Q	L	H	R	A	.	.	.	.	.	.	.	D	Y	V	A	A	Q	K	C	V	R	E	S	Y	S	I	P	G	F	S	G	S	E	D	C	A	A	L	E	D	L	L	Q	A	Y	D	E	Q	D
Template Known Secondary structure															T	T																			T	T	.	.	.	.	.	.	.													T	T	S	T	T	S	T	T	S															T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		144	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	R	R	K	N	K	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	Q	L	L	R	V	C	R
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions