Return to main results Retrieve Phyre Job Id

Job DescriptionP32106
Confidence86.46%DateWed Jan 25 15:20:49 GMT 2012
Rank70Aligned Residues130
% Identity8%Templatec2ho1B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:type 4 fimbrial biogenesis protein pilf; PDBTitle: functional characterization of pseudomonas aeruginosa pilf
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  LFFYFSFICQLHGADVKIKQNESMMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIYKQLRFLERSAS
Query Conservation   
            
                      
   
  

  
   
   

        
   
     


 
Alig confidence 















































































Template Conservation 
                                                                     
         
Template Sequence  ADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQXKKPAQAKEYFEKSLR
Template Known Secondary structure  SSS

TT
TT
TT
TTTT
Template Predicted Secondary structure 




























































Template SS confidence 















































































   1090.........1100.........1110.........1120.........1130.........1140.........1150.........1160.........
 
   87. .90.........100.........110.........120...... ...130.........140...
Predicted Secondary structure  ..








..



Query SS confidence 

. .





































. .
















Query Sequence  QG. . NVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNN. . GNIDAKSKLQELKKLKR
Query Conservation   
..   
   

  
  
 
   
      
      

  ..
   
   
  
     
Alig confidence 

..















.......














..
















Template Conservation              
       .......    
      

   
     
          
Template Sequence  LNRNQPSVALEXADLLYKER. . . . . . . EYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFE
Template Known Secondary structure 
S

TT.......
TT



TT
Template Predicted Secondary structure 


















.......





Template SS confidence 




























































   1170.........1180......... 1190.........1200.........1210.........1220...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions