Job Description P32106 Confidence 96.26% Date Wed Jan 25 15:20:49 GMT 2012 Rank 32 Aligned Residues 87 % Identity 16% Template c2c2lD_ PDB info PDB header:chaperone Chain: D: PDB Molecule:carboxy terminus of hsp70-interacting protein; PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase Resolution 3.3 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																				.	.
Query SS confidence																									.	.																																				.	.
Query Sequence		M	G	S	T	A	M	T	Y	D	L	S	E	E	K	L	M	K	L	K	Y	K	S	Q	.	.	H	G	D	S	E	A	S	F	R	L	Y	Q	Y	Y	C	F	T	K	N	N	I	Y	K	Q	L	R	F	L	E	R	S	A	S	Q	G	.	.	N	V	T	A	Q	F	N	Y	G	V	F	L	S	D	T	N	P	T
Query Conservation																									.	.																																				.	.
Alig confidence																									.	.																			.																	.	.																	.	.
Template Conservation																																													.																																			.	.
Template Sequence		Q	G	N	R	L	F	V	G	R	K	Y	P	E	A	A	A	C	Y	G	R	A	I	T	R	N	P	L	V	A	V	Y	Y	T	N	R	A	L	C	Y	L	K	M	Q	.	Q	P	E	Q	A	L	A	D	C	R	R	A	L	E	L	D	G	Q	S	V	K	A	H	F	F	L	G	Q	C	Q	L	E	M	E	.	.
Template Known Secondary structure									T	T																	T	T													T	T	T		.																	S													T	T	T	T	T	.	.
Template Predicted Secondary structure																																													.																																			.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	E	Y	Y	N	L	N	R	A	I	Y	W	M	E	F	A	V	N
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	S	Y	D	E	A	I	A	N	L	Q	R	A	Y	S
Template Known Secondary structure		.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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