|   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | D | A | L | E | R | E | V | M | K | D | D | I | F | F | R | T | S | G | G | G | V | T | L | S | G | G | E | V | L | M | Q | A | E | F | A | T | R | F | L | Q | R | L | R | L | W | G | V | S | C | A | I | E | T | A | G | D | A | P | A | S | K | L | L | P | L | A | K | L | C | D | E | V | L | F | D | L | K | I |
Query Conservation |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |
|
|
|
|
|   |   |   |   |   |   |
|   |   | . |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
S | P | E | E | M | A | A | D | A | E | N | Y | L | K | Q | G | F | Q | T | L | . |
K | I | K | V | G | K | D | D | I | A | T | D | I | A | . |
R | I | Q | E | I | R | K | R | V | G | S | A | V | K | L | R | L | D | A | N | Q | G | W | R | P | K | E | A | V | T | A | I | R | K | M | E | D | A | G | L | G | I | E | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  | . |  |  |  |
| S | S | S |
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | G | G | G | S |  |  |  |  |  |
| T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
  |
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | D | A | T | Q | A | R | D | V | V | K | M | N | L | P | R | V | L | E | N | L | R | L | L | V | S | E | G | V | N | V | I | P | R | L | P | L | I | P | G | F | T | L | S | R | E | N | M | Q | Q | A | L | D | V | L | I | P | L | N | I | R | Q | I | H | L | L | P | F | H | Q | Y | G | E | P | K | Y | R | L | L | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   | . | . | . | . | . |
Template Sequence |   |
V | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | H | K | D | D | L | A | G | L | K | K | V | T | D | A | T | D | T | P | I | M | A | D | E | S | V | F | T | . |
. |
. |
. |
P | R | Q | A | F | E | V | L | Q | T | R | S | A | D | L | I | N | I | K | L | M | K | A | G | G | I | S | G | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |
| . | . | . | . | . | . | . | . | . | . | . |
| S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  | S | T | T |
| S | S | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |
|  |  |  |  | T | S |  |  |  | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
218 | . | 220 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
|
|
|
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | |
|
|
|
|
  |
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | W | S | M | K | E | V | P | A | P | S | S | A | D | V | A | T | M | R | E | M | A | E | R | A | G | L | Q | V | T | V | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | K | I | N | A | M | A | E | A | C | G | V | E | C | M | V | G | S |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
278 | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
  |