Return to main results Retrieve Phyre Job Id

Job DescriptionP32675
Confidence75.80%DateThu Jan 5 11:50:03 GMT 2012
Rank113Aligned Residues67
% Identity9%Templatec3blpX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:alpha-amylase 1; PDBTitle: role of aromatic residues in human salivary alpha-amylase
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.. ...230.........240.........250... ......260.........270.........280.........290
Predicted Secondary structure  .










......
















Query SS confidence 


.


























. . . . . .




































Query Sequence  ENM. QQALDVLIPLNIRQIHLLPFHQYGEPK. . . . . . YRLLGKTWSMKEVPAPSSADVATMREMAERAGLQVTV
Query Conservation   

.  
   
  

   
 
 
  
 
  
......   
           
  
 
          
  
 
Alig confidence 


.


























......




































Template Conservation    
      

  

  



 
          
      
   

 

   

  


 

  

  

 


Template Sequence  VDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYV
Template Known Secondary structure  TTTTTT




S
BB

TTTTS
GGGGGSBS
S
S
BTTB
TT
Template Predicted Secondary structure 





























Template SS confidence 









































































   22.......30.........40.........50.........60.........70.........80.........90.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions