Job Description P32675 Confidence 98.33% Date Thu Jan 5 11:50:03 GMT 2012 Rank 13 Aligned Residues 179 % Identity 11% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		A	D	E	C	P	S	G	A	F	E	R	I	G	R	D	I	S	L	D	A	L	E	R	E	V	M	K	D	D	I	F	F	R	T	S	G	G	G	V	T	L	S	G	G	E	V	L	M	.	.	.	.	.	.	Q	A	E	F	A	T	R	F	L	Q	R	L	R	L	W	G	V	S	C	A	I	E	T	A	G	D
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																		.	.	.														.	.	.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		R	P	Y	A	Y	V	K	I	S	D	G	S	L	R	S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	.	.	.	K	K	E	I	I	L	V	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	N	G	E	F	W	I	R	V	X	Y	L
Template Known Secondary structure			S							B						B																T	T	.	.	.									S		G	G	G	T	T	T	T	T	T	S	S												T	S	S	S	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
						157	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.													.	.	.																						.																															.
Query SS confidence		.	.	.	.													.	.	.																						.																															.
Query Sequence		.	.	.	.	A	P	A	S	K	L	L	P	L	A	K	L	.	.	.	C	D	E	V	L	F	D	L	K	I	M	D	A	T	Q	A	R	D	V	V	K	.	M	N	L	P	R	V	L	E	N	L	R	L	L	V	S	E	G	V	N	V	I	P	R	L	P	L	I	P	G	F	.	T	L	S	R	E	N	M	Q
Query Conservation		.	.	.	.													.	.	.																						.																															.
Alig confidence		.	.	.	.													.	.	.																						.																															.
Template Conservation
Template Sequence		H	P	D	H	L	T	E	E	I	I	S	A	X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	V	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D	F	E
Template Known Secondary structure			G	G	G													T	T	B		S							B		S									T			S																	T	T										S		T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	D	V	L	I	P	L	N	I	R	Q	I	H	L	L	P	F	H	Q	Y	G	E	P	K	Y	R	L	L	G	K	T	W	S	M	K	E	V	P	A	P	S	S	A	D	V	A	T	M	R	E	M	A	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	K	Q	F	V	E	E	I	Q	F	D	K	L	G	A	F	V	Y	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	D	P	E	X	A	K	R	R	Q	E	E	L	L	L
Template Known Secondary structure													S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.																			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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