Job Description P32675 Confidence 20.79% Date Thu Jan 5 11:50:03 GMT 2012 Rank 291 Aligned Residues 178 % Identity 13% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	G	A	F	E	R	I	G	R	D	I	S	L	D	A	L	E	R	E	V	M	K	D	D	I	F	F	R	T	S	G	G	G	V	T	L	S	G	G	E	V	L	M	Q	A	E	F	A	T	R	F	L	Q	R	L	R	L	W	G	V	S	C	A	I	E	T	A	G	D	A	P	A	S	K	L	L	P	L	A
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		P	R	D	G	L	Q	N	E	K	Q	P	I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	.	G	V	T	Y	A	A	L	A	P	N	L	K	G	F	E	A	A	L	E
Template Known Secondary structure		T	T					T	S	S	S																	T	T		S								S		T	T	T		G	G	G	T	T								S				T	.	T	S								S
Template Predicted Secondary structure																																																														.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																															.	.	.	.
Query SS confidence																											.	.	.																															.	.	.	.
Query Sequence		K	L	C	D	E	V	L	F	D	L	K	I	M	D	A	T	Q	A	R	D	V	V	K	M	N	.	.	.	L	P	R	V	L	E	N	L	R	L	L	V	S	E	G	V	N	V	I	P	R	L	P	L	I	P	G	F	T	L	.	.	.	.	S	R	E	N	M	Q	Q	A	L	D	V	L	I	P	L	N	I	R
Query Conservation																											.	.	.																															.	.	.	.
Alig confidence																											.	.	.																															.	.	.	.
Template Conservation
Template Sequence		S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	Q	Q	M	G	C	Y
Template Known Secondary structure		T	T										S										S	S																			T	T										T	T		B	T	T	T	B																	T	T		S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	H	L	L	P	F	H	Q	Y	G	E	P	K	Y	R	L	L	G	K	T	W	S	M	K	E	V	P	A	P	S	S	A	D	V	A	T	M	R	E	M	A	E	R	A
Query Conservation
Alig confidence						.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	S	L	.	.	G	D	T	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E
Template Known Secondary structure						.	.			S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T
Template Predicted Secondary structure						.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.			.	.	.	180	.	.																		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions