Job Description P32675 Confidence 22.54% Date Thu Jan 5 11:50:03 GMT 2012 Rank 270 Aligned Residues 131 % Identity 15% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		135	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	R	F	L	Q	R	L	R	L	W	G	.	.	V	S	C	A	I	E	T	A	G	D	A	P	A	S	K	L	L	P	L	A	K	.	.	.	.	.	L	C	D	E	V	L	F	D	L	K	I	M	D	A	T	Q	A	R	D	V	.	.	.	.	.	.	.	.	.	.	V	K	M	N	L	P	R	V	L	E
Query Conservation														.	.																						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																						.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	D	K	F	T	E	L	K	E	K	R	E	K	A	L	V	S	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E
Template Known Secondary structure													T	B									T	T	S	S															T	T		S									S			T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	R	L	L	V	S	E	G	V	N	V	I	P	R	L	P	L	I	P	G	F	T	L	S	R	E	N	M	Q	Q	A	L	D	V	L	I	P	L	N	I	R	Q	I	H	L	L	P	F	H	Q	Y	G	E	P	K	Y	R	L	L	G	K	T	W	S	M	K	E	V	P	A	P	S	S	A	D	V	A	T	M
Query Conservation
Alig confidence																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P	I	F	.	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	L	P	P	E	E	A	E	E	L
Template Known Secondary structure											T	T	S													.														T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																										.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																								.	130	.	.	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	M	A	E	R	A	G	L	Q	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	V	M	K	K	Y	V	L	S	F	V
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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