 |
Job Description | P32675 | Confidence | 51.94% | Date | Thu Jan 5 11:50:03 GMT 2012 |
Rank | 161 | Aligned Residues | 61 |
% Identity | 25% | Template | c1zcoA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; |
PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase
|
Resolution | 2.25 Å |
|
 |
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | F | T | L | S | R | E | N | M | Q | Q | A | L | D | V | L | I | P | L | N | I | R | Q | I | H | L | L | P | F | H | Q | Y | G | E | P | K | Y | R | L | L | G | K | T | W | S | M | K | E | V | P | A | P | S | S | A | D | V | A | T | M | R | E | M | A | E | R | A | G | L | Q | V |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
Template Sequence |   |
P | C | S | I | E | S | R | E | Q | I | M | K | V | A | E | F | L | A | E | V | G | I | K | V | L | R | G | G | A | F | K | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | T | S | P | Y | S | F | Q | G | Y | G | E | K | A | L | R | W | M | R | E | A | A | D | E | Y | G | L | V | T |
Template Known Secondary structure |   |
| S | B |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
| B | S | S |
|
| . | . | . | . | . | . | . | . | . | . | . |
| S | S | T | T | S |
|
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|