Job Description P32675 Confidence 90.64% Date Thu Jan 5 11:50:03 GMT 2012 Rank 42 Aligned Residues 77 % Identity 18% Template c1bagA_ PDB info PDB header:alpha-amylase Chain: A: PDB Molecule:alpha-1,4-glucan-4-glucanohydrolase; PDBTitle: alpha-amylase from bacillus subtilis complexed with2 maltopentaose Resolution 2.50 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																.
Query SS confidence																																											.	.	.	.	.	.	.	.	.																.
Query Sequence		P	L	I	P	G	F	T	L	S	R	E	N	M	Q	Q	A	L	D	V	L	I	P	L	N	I	R	Q	I	H	L	L	P	F	H	Q	Y	G	E	P	K	Y	.	.	.	.	.	.	.	.	.	R	L	L	G	K	T	W	S	M	K	E	V	P	A	P	.	S	S	A	D	V	A	T	M	R	E	M	A	E	R
Query Conservation																																											.	.	.	.	.	.	.	.	.																.
Alig confidence																																											.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		T	I	L	H	A	W	N	W	S	F	N	T	L	K	H	N	M	K	D	I	H	D	A	G	Y	T	A	I	Q	T	S	P	I	N	Q	V	K	E	G	N	Q	G	D	K	S	M	S	N	W	Y	W	L	Y	Q	P	T	S	Y	Q	I	G	N	R	Y	L	G	T	E	Q	E	F	K	E	M	C	A	A	A	E	E
Template Known Secondary structure							T	T	B								T							T	T		S					S								T	G	G	G				G	G	G	G	G	G	G	G										T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	Q	V	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	I	K	V	I	V
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions