Email l.a.kelley@imperial.ac.uk Description P69330 Date Thu Jan 5 12:11:21 GMT 2012 Unique Job ID 5264530388ca91ce

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ufwa_ 56.6 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 2 d2dy1a3 51.1 29 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 3 c2dnrA_ 41.8 19 PDB header:rna binding protein Chain: A: PDB Molecule:synaptojanin-1; PDBTitle: solution structure of rna binding domain in synaptojanin 1 4 d2bv3a3 37.4 21 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 5 c1vbkA_ 32.3 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1313; PDBTitle: crystal structure of ph1313 from pyrococcus horikoshii ot3 6 d1mg7a1 25.6 12 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Early switch protein XOL-1, N-terminal domain 7 d1vbka2 24.1 14 Fold:THUMP domain Superfamily:THUMP domain-like Family:THUMP domain 8 c2nscA_ 22.1 19 PDB header:chaperone Chain: A: PDB Molecule:trigger factor; PDBTitle: structures of and interactions between domains of trigger factor from2 themotoga maritima 9 d1am7a_ 21.1 37 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Lambda lysozyme 10 c1mg7B_ 20.0 13 PDB header:gene regulation Chain: B: PDB Molecule:early switch protein xol-1 2.2k splice form; PDBTitle: crystal structure of xol-1 11 c3jvnA_ 15.6 27 PDB header:transferase Chain: A: PDB Molecule:acetyltransferase; PDBTitle: crystal structure of the acetyltransferase vf_1542 from vibrio2 fischeri, northeast structural genomics consortium target vfr136 12 d1uwda_ 15.4 10 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 13 d2cu6a1 14.0 14 Fold:Alpha-lytic protease prodomain-like Superfamily:Fe-S cluster assembly (FSCA) domain-like Family:PaaD-like 14 c3gtyX_ 12.8 19 PDB header:chaperone/ribosomal protein Chain: X: PDB Molecule:trigger factor; PDBTitle: promiscuous substrate recognition in folding and assembly activities2 of the trigger factor chaperone 15 c3ffvA_ 12.7 18 PDB header:protein binding Chain: A: PDB Molecule:protein syd; PDBTitle: crystal structure analysis of syd 16 d2nn6h2 12.7 25 Fold:Barrel-sandwich hybrid Superfamily:Ribosomal L27 protein-like Family:ECR1 N-terminal domain-like 17 d1ttea1 10.5 31 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 18 d1wina_ 10.2 17 Fold:EF-Ts domain-like Superfamily:Band 7/SPFH domain Family:Band 7/SPFH domain 19 c2zkqi_ 9.6 15 PDB header:ribosomal protein/rna Chain: I: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 20 d1regx_ 9.2 17 Fold:Ferredoxin-like Superfamily:Translational regulator protein regA Family:Translational regulator protein regA 21 d1z7ma1 not modelled 9.1 9 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 22 d1yd9a1 not modelled 8.8 15 Fold:Macro domain-like Superfamily:Macro domain-like Family:Macro domain 23 c1fwlD_ not modelled 8.7 13 PDB header:transferase Chain: D: PDB Molecule:homoserine kinase; PDBTitle: crystal structure of homoserine kinase 24 d1puga_ not modelled 8.4 18 Fold:YbaB-like Superfamily:YbaB-like Family:YbaB-like 25 d1dwka2 not modelled 8.3 7 Fold:Cyanase C-terminal domain Superfamily:Cyanase C-terminal domain Family:Cyanase C-terminal domain 26 d1w1oa1 not modelled 8.1 16 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Cytokinin dehydrogenase 1 27 c3m0zD_ not modelled 7.6 13 PDB header:lyase Chain: D: PDB Molecule:putative aldolase; PDBTitle: crystal structure of putative aldolase from klebsiella2 pneumoniae. 28 c2kq1A_ not modelled 7.5 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:bh0266 protein; PDBTitle: solution structure of protein bh0266 from bacillus2 halodurans. northeast structural genomics consortium target3 bhr97a 29 c1zr5B_ not modelled 7.2 14 PDB header:gene regulation Chain: B: PDB Molecule:h2afy protein; PDBTitle: crystal structure of the macro-domain of human core histone variant2 macroh2a1.2 30 d1t11a2 not modelled 6.9 32 Fold:Ribosome binding domain-like Superfamily:Trigger factor ribosome-binding domain Family:Trigger factor ribosome-binding domain 31 c1ybxA_ not modelled 6.6 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: conserved hypothetical protein cth-383 from clostridium thermocellum 32 c3lnoA_ not modelled 6.5 19 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of domain of unknown function duf59 from2 bacillus anthracis 33 d1p97a_ not modelled 6.5 17 Fold:Profilin-like Superfamily:PYP-like sensor domain (PAS domain) Family:Hypoxia-inducible factor Hif2a, C-terminal domain 34 c2jo7A_ not modelled 6.5 63 PDB header:surface active protein Chain: A: PDB Molecule:glycosylphosphatidylinositol-anchored merozoite PDBTitle: solution structure of the adhesion protein bd37 from2 babesia divergens 35 d1p42a1 not modelled 6.4 30 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC 36 c1usvB_ not modelled 6.3 15 PDB header:chaperone Chain: B: PDB Molecule:aha1; PDBTitle: the structure of the complex between aha1 and hsp90 37 c3ew5B_ not modelled 6.2 11 PDB header:rna binding protein Chain: B: PDB Molecule:macro domain of non-structural protein 3; PDBTitle: structure of the tetragonal crystal form of x (adrp) domain2 from fcov 38 d1o75a3 not modelled 6.1 29 Fold:Tp47 lipoprotein, N-terminal domain Superfamily:Tp47 lipoprotein, N-terminal domain Family:Tp47 lipoprotein, N-terminal domain 39 c3h0gO_ not modelled 6.0 23 PDB header:transcription Chain: O: PDB Molecule:dna-directed rna polymerase ii subunit rpb3; PDBTitle: rna polymerase ii from schizosaccharomyces pombe 40 d2q3la1 not modelled 5.9 8 Fold:SpoIIaa-like Superfamily:SpoIIaa-like Family:Sfri0576-like 41 d1y14b2 not modelled 5.9 18 Fold:Dodecin subunit-like Superfamily:N-terminal, heterodimerisation domain of RBP7 (RpoE) Family:N-terminal, heterodimerisation domain of RBP7 (RpoE) 42 c3q71A_ not modelled 5.8 14 PDB header:transferase Chain: A: PDB Molecule:poly [adp-ribose] polymerase 14; PDBTitle: human parp14 (artd8) - macro domain 2 in complex with adenosine-5-2 diphosphoribose 43 c2rpbA_ not modelled 5.7 11 PDB header:membrane protein Chain: A: PDB Molecule:hypothetical membrane protein; PDBTitle: the solution structure of membrane protein 44 c1ta9A_ not modelled 5.6 11 PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol dehydrogenase; PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe 45 d1v54g_ not modelled 5.5 25 Fold:Single transmembrane helix Superfamily:Mitochondrial cytochrome c oxidase subunit VIa Family:Mitochondrial cytochrome c oxidase subunit VIa 46 d1u0ua2 not modelled 5.4 11 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 47 d1ee0a2 not modelled 5.4 11 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 48 d1usub_ not modelled 5.4 15 Fold:Aha1/BPI domain-like Superfamily:Activator of Hsp90 ATPase, Aha1 Family:Activator of Hsp90 ATPase, Aha1 49 c3imkA_ not modelled 5.3 40 PDB header:metal binding protein Chain: A: PDB Molecule:putative molybdenum carrier protein; PDBTitle: crystal structure of putative molybdenum carrier protein (yp_461806.1)2 from syntrophus aciditrophicus sb at 1.45 a resolution 50 d2ba0a2 not modelled 5.3 17 Fold:Barrel-sandwich hybrid Superfamily:Ribosomal L27 protein-like Family:ECR1 N-terminal domain-like 51 d1mxaa3 not modelled 5.2 40 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 52 d1wuda1 not modelled 5.1 13 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases