Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED5
Confidence94.46%DateThu Jan 5 11:23:03 GMT 2012
Rank170Aligned Residues42
% Identity14%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   150......... 160.... .....170.........180.........190.
Predicted Secondary structure 







...




Query SS confidence 









. .




.


























Query Sequence  LSERELQIML. . MITKG. QKVNEISEQLNLSPKTVNSYRYRMFSK
Query Conservation 

 

  

 .. 
  
. 





  
 

  

  
   
  
Alig confidence 









..




.


























Template Conservation 

     


  
         


  
 

 



  
  
   
Template Sequence  ITDTDVAVLLKXVEIEKPITSEELADIFKLSKTTVENSLKKLIEL
Template Known Secondary structure 


S
T

T
Template Predicted Secondary structure 











Template SS confidence 












































   1920.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions