Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED5
Confidence96.48%DateThu Jan 5 11:23:03 GMT 2012
Rank151Aligned Residues171
% Identity17%Templatec3p7nB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70... ......80.........90.........100..
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Query Sequence  AVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARST. . . . . . . . . . . . . . . . ADVKIIMLTVHTENPLPAKVMQAGAAGYL
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Template Sequence  VLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNY
Template Known Secondary structure  T
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TTSTT





TTS
GGGGB
TTS
TT

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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVN
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Template Sequence  KKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVGMARRERAAEMLKTLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVK
Template Known Secondary structure 
TTS
TTTT

TTS
TT

T

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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   183......190.........200.........
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Query Sequence  SYRYRMFSKLNIHGDVELTHLAIRHGL
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Template Sequence  MHRGLVMEKLNLKTSADLVRIAVEAGI
Template Known Secondary structure  TT

STT
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   196...200.........210.........220..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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