Return to main results Retrieve Phyre Job Id

Job DescriptionP0AED5
Confidence99.44%DateThu Jan 5 11:23:03 GMT 2012
Rank84Aligned Residues115
% Identity17%Templatec3hebB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:response regulator receiver domain protein (chey); PDBTitle: crystal structure of response regulator receiver domain from2 rhodospirillum rubrum
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40... ......50.........60.........70..
Predicted Secondary structure 









.........

















Query SS confidence 









































. . . . . . . . .




























Query Sequence  INVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWC. . . . . . . . . RTNAVDVVLMDMSMPGIGGLEATRKIARS
Query Conservation   






       
   
       

  
    


   .........     



 
  
    
          
Alig confidence 









































.........




























Template Conservation 
 






      
   
   
    
        

  
              





  

   
      

  
Template Sequence  VTIVXIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDXTGIDILKLVKEN
Template Known Secondary structure 



TT



SS
TT
SSGGGTT
B
SB
SSSBS
Template Predicted Secondary structure 

























Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   73 ......80.........90.........100.........110......
Predicted Secondary structure 
..






























Query SS confidence 
. .










































Query Sequence  T. . ADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIR
Query Conservation   ..                            
              
Alig confidence 
..










































Template Conservation         

  
              
    
 

     
   
 
Template Sequence  PHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIR
Template Known Secondary structure  TTTTTS
S


TT
S

SS
Template Predicted Secondary structure 


















Template SS confidence 













































   88.90.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions