Job Description P0AED5 Confidence 81.51% Date Thu Jan 5 11:23:03 GMT 2012 Rank 331 Aligned Residues 175 % Identity 10% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		I	N	V	L	L	V	D	D	H	E	L	V	R	A	G	I	R	R	I	L	E	D	I	K	G	I	K	V	V	G	E	A	S	C	G	E	D	A	V	K	W	C	R	T	.	.	N	A	V	D	V	V	L	M	D	M	S	M	P	G	I	G	G	L	E	A	T	R	K	I	A	R	S	T	A	D	V	K	I	I
Query Conservation																																														.	.
Alig confidence																									.																					.	.								.	.	.	.	.	.	.
Template Conservation																									.																														.	.	.	.	.	.	.
Template Sequence		L	K	I	A	L	I	S	Q	N	E	N	L	L	N	L	F	P	K	L	A	L	E	K	.	N	F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	.	.	.	.	.	.	.	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I
Template Known Secondary structure									S																.	T																					T	T	T		S				.	.	.	.	.	.	.											T	T		S	S
Template Predicted Secondary structure																									.																														.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	T	V	H	T	E	N	P	L	P	A	K	V	M	Q	A	G	A	A	G	Y	L	S	K	G	A	A	P	Q	E	V	V	S	A	I	R	S	V	Y	S	G	Q	R	Y	I	A	S	D	I	A	Q	Q	M	A	L	S	Q	I	E	P	E	K	T	E	S	P	F	A	S	L	S	E	R	E	L	Q	I	M	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	R	F	D	T	M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D	K	H	E	I	E	A	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	V	K	I	K	E	F	L	F	S	S	E	D	E	I	T	T	L	I	S	K	V	K	T	E	N	I	K
Template Known Secondary structure																G	G	G		S								S	S		S	S										T	.	.	.	.	.	.	.	.	.	.	.	.										S	G	G	G											T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.													.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		M	I	T	K	G	Q	K	V	N	E	I	S	E	Q	L	N	L	.	.	.	.	.	.	.	S	P	K	T	V	N	S	Y	R	Y	R	M	F	S	K	L	N	I	H	G
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	V	S	G	K	T	V	T	D	E	A	I	K	Q	G	L	Y	G	E	T	I	N	S	G	E	E	S	L	R	R	A	I	E	E	A	L	N	L	I	E	V	R	N
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions