Job Description P0AED5 Confidence 99.85% Date Thu Jan 5 11:23:03 GMT 2012 Rank 7 Aligned Residues 192 % Identity 21% Template c1ys7B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulatory protein prra; PDBTitle: crystal structure of the response regulator protein prra comlexed with2 mg2+ Resolution 1.58 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	L	V	D	D	H	E	L	V	R	A	G	I	R	R	I	L	E	D	I	K	G	I	K	V	V	G	E	A	S	C	G	E	D	A	V	K	W	C	R	T	N	A	V	D	V	V	L	M	D	M	S	M	P	G	I	G	G	L	E	A	T	R	K	I	A	R	S	T	A	D	V	K	I	I	M	L	T
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		R	V	L	V	V	D	D	D	S	D	V	L	A	S	L	E	R	G	L	R	L	S	G	.	.	F	E	V	A	T	A	V	D	G	A	E	A	L	R	S	A	T	E	N	R	P	D	A	I	V	L	D	I	N	M	P	V	L	D	G	V	S	V	V	T	A	L	R	A	M	D	N	D	V	P	V	C	V	L	S
Template Known Secondary structure								S															T	T	.	.							S	S											S			S						S	S		S	S	S												T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		V	H	T	E	N	P	L	P	A	K	V	M	Q	A	G	A	A	G	Y	L	S	K	G	A	A	P	Q	E	V	V	S	A	I	R	S	V	Y	S	G	Q	R	Y	I	A	S	D	I	A	Q	Q	M	A	L	S	.	.	.	.	.	.	Q	I	E	P	E	K	T	E	S	P	F	A	S	L	S	E	R	E	L	Q
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	S	S	V	D	D	R	V	A	G	L	E	A	G	A	D	D	Y	L	V	K	P	F	V	L	A	E	L	V	A	R	V	K	A	L	L	R	R	R	G	S	T	A	T	S	S	S	E	T	I	T	V	G	P	L	E	V	D	I	P	G	R	R	A	R	V	N	G	V	D	V	D	L	T	K	R	E	F	D
Template Known Secondary structure			T	T												T								S																T	S	S	S		S					S					T	T					T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		157	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.											.	.	.	.	.
Query SS confidence										.	.	.	.											.	.	.	.	.
Query Sequence		I	M	L	M	I	T	K	G	.	.	.	.	Q	K	V	N	E	I	S	E	Q	L	.	.	.	.	.	N	L	S	P	K	T	V	N	S	Y	R	Y	R	M	F	S	K	L	N	I	H	G
Query Conservation										.	.	.	.											.	.	.	.	.
Alig confidence										.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		L	L	A	V	L	A	E	H	K	T	A	V	L	S	R	A	Q	L	L	E	L	V	W	G	Y	D	F	A	A	D	T	N	V	V	D	V	F	I	G	Y	L	R	R	K	L	E	A	G	G
Template Known Secondary structure									T	T	T												T	T				S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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