Return to main results Retrieve Phyre Job Id

Job DescriptionP24180
Confidence99.84%DateThu Jan 5 11:40:57 GMT 2012
Rank5Aligned Residues236
% Identity59%Templated1vf7a_
SCOP infoHlyD-like secretion proteins HlyD-like secretion proteins HlyD-like secretion proteins
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80.........90.........100.........110.........120.........
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Query Sequence  EVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYV
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Template Sequence  TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQA
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S


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   26...30.........40.........50.........60.........70.........80.........90.........100.....
 
   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  PLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLD
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Template Sequence  VS. . . . . . . . . . . . . . KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLD
Template Known Secondary structure  S
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   106. ..110.........120.........130.........140.........150.........160.........170.
 
   210.........220..... ....230.........240.........250.........260.........270.........280........
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Query Sequence  PIYVDVTQSSNDFMRL. KQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLP
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Template Sequence  PIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLP
Template Known Secondary structure 

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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   289290.........
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Query Sequence  GMFVRARIDEG
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Template Sequence  GMFVHAQLQEG
Template Known Secondary structure  T


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   252.......260..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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