Job Description P24180 Confidence 99.91% Date Thu Jan 5 11:40:57 GMT 2012 Rank 2 Aligned Residues 228 % Identity 76% Template c2f1mA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:acriflavine resistance protein a; PDBTitle: conformational flexibility in the multidrug efflux system protein acra Resolution 2.71 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	E	L	P	G	R	T	N	A	Y	R	I	A	E	V	R	P	Q	V	S	G	I	V	L	N	R	N	F	T	E	G	S	D	V	Q	A	G	Q	S	L	Y	Q	I	D	P	A	T	Y	Q	A	N	Y	D	S	A	K	G	E	L	A	K	S	E	A	A	A	A	I	A	H	L	T	V	K	R	Y	V	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	E	L	P	G	R	T	S	A	Y	R	I	A	E	V	R	P	Q	V	S	G	I	I	L	K	R	N	F	K	E	G	S	D	I	E	A	G	V	S	L	Y	Q	I	D	P	A	T	Y	Q	A	T	Y	D	S	A	K	G	D	L	A	K	A	Q	A	A	A	N	I	A	Q	L	T	V	N	R	Y	Q	K	L
Template Known Secondary structure												S								S	S									S		T	T					T	T	S		S																																						T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	T	K	Y	I	S	Q	Q	E	Y	D	Q	A	I	A	D	A	R	Q	A	D	A	A	V	I	A	A	K	A	T	V	E	S	A	R	I	N	L	A	Y	T	K	V	T	A	P	I	S	G	R	I	G	K	S	T	V	T	E	G	A	L	V	T	N	G	Q	T	T	E	L	A	T	V	Q	Q	L	D	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	T	Q	Y	I	S	K	Q	E	Y	D	Q	A	L	A	D	A	Q	Q	A	N	A	A	V	T	A	A	K	A	A	V	E	T	A	R	I	N	L	A	Y	T	K	V	T	S	P	I	S	G	R	I	G	K	S	N	V	T	E	G	A	L	V	Q	N	G	Q	A	T	A	L	A	T	V	Q	Q	L	D	P	I
Template Known Secondary structure		T	T	S	T	T																																				T	T					S	S								S	S		T	T					T	T		S	S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	D	V	T	Q	S	S	N	D	F	M	R	L	K	Q	S	V	E	Q	G	N	L	H	K	E	N	A	T	S	N	V	E	L	V	M	E	N	G	Q	T	Y	P	L	K	G	T	L	Q	F	S	D	V	T	V	D	E	S	T	G	S	I	T	L	R	A	V	F	P	N	P	Q	H	T	L	L	P	G	M	F
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	D	V	T	Q	S	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	X	K	A	K	V	S	L	I	T	S	D	G	I	K	F	P	Q	D	G	T	L	E	F	S	D	V	T	V	D	Q	T	T	G	S	I	T	L	R	A	I	F	P	N	P	D	H	T	X	X	P	G	X	F
Template Known Secondary structure									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										S	S	S		B		S	S		B			S	S	S						S	S	S												T	T					S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.																		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		292	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	A	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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