 |
Job Description | P76102 | Confidence | 46.41% | Date | Thu Jan 5 12:18:56 GMT 2012 |
Rank | 190 | Aligned Residues | 37 |
% Identity | 5% | Template | c3mv2A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:coatomer subunit alpha; |
PDBTitle: crystal structure of a-cop in complex with e-cop
|
Resolution | 2.90 Å |
|
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | Q | V | L | A | V | P | P | A | Y | T | S | Q | R | C | A | Y | C | G | H | T | A | K | E | N | R | L | S | Q | S | K | F | R | C | Q | V | C | G | Y |
Query Conservation |   |
|
|   |
|   |   |
|   |
|   |
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |   | . |   |   |
|   |
| . | . |
|   |
|
|   |
|
Template Sequence |   |
A | A | T | Y | K | P | I | Y | E | D | T | P | S | V | S | D | P | L | T | G | S | K | Y | V | I | T | . |
E | K | D | K | I | . |
. |
D | R | I | A | M | I |
Template Known Secondary structure |   |
T | T | T |
|
|  |  |  | S | S | S |
|  |  |  |
| T | T | T |
|
|  |  |  | G | G | . | G | T | T | S | B | . | . |
| S | S | S | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  | . |  |  |
|
|
| . | . |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1151 | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | |
. | . | . | 1180 | . | |
|
. | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|