Return to main results Retrieve Phyre Job Id

Job DescriptionP76102
Confidence21.95%DateThu Jan 5 12:18:56 GMT 2012
Rank357Aligned Residues25
% Identity24%Templatec2zkqn_
PDB info PDB header:ribosomal protein/rnaChain: N: PDB Molecule: PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution8.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   311........320.........330......
Predicted Secondary structure 





















Query SS confidence 

























Query Sequence  SQRCAYCGHTAKENRLSQSKFRCQVC
Query Conservation 

 
  

          
   
  
Alig confidence 














.









Template Conservation 

 

 

   



.



 




Template Sequence  SRSCRVCSNRHGLIR. KYGLNMCRQC
Template Known Secondary structure 



SSS

STT

T.TT


S
Template Predicted Secondary structure 







.





Template SS confidence 

























   18.20.........30.. .......40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions