 |
Job Description | P76102 | Confidence | 24.55% | Date | Thu Jan 5 12:18:56 GMT 2012 |
Rank | 324 | Aligned Residues | 31 |
% Identity | 19% | Template | c2l43A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:n-teminal domain from histone h3.3, linker, phd1 domain |
PDBTitle: structural basis for histone code recognition by brpf2-phd1 finger
|
Resolution | UNK |
|
  |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | R | C | A | Y | C | G | H | T | A | K | E | N | R | L | S | Q | S | K | F | R | C | Q | V | C | G | Y | T | A | N | A | D |
Query Conservation |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|   |   |   |   |   |   |   | . | . |   |   |   |   |
|   |
|
|   |
|   |   |   |   |
|   |   |
Template Sequence |   |
D | A | V | C | S | I | C | M | D | G | E | S | Q | N | . |
. |
S | N | V | I | L | F | C | D | M | C | N | L | A | V | H | Q | E |
Template Known Secondary structure |   |
|
|
|
| S | S |
|
| S | S | S | S |
| S | . | . |  |  |  |  |  |  |
| S | S | S |
|
|
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|