 |
| Job Description | P76102 | | Confidence | 52.09% | Date | Thu Jan 5 12:18:56 GMT 2012 |
| Rank | 156 | Aligned Residues | 25 |
| % Identity | 24% | Template | c2iqjB_ |
| PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:stromal membrane-associated protein 1-like; |
PDBTitle: crystal structure of the gap domain of smap1l (loc64744)2 stromal membrane-associated protein 1-like
|
| Resolution | 1.90 Å |
|
| | |
312 | . | . | . | . | . | . | . | 320 | . | . | . | |
. | . | . | . | . | . | 330 | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|  | | |  |
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | R | C | A | Y | C | G | H | T | A | K | E | . |
N | R | L | S | Q | S | K | F | R | C | Q | V | C |
| Query Conservation | |
| |
| | |
|
| | | | | | . | | | | | |
| | | |
| | |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
|
|
| | | |
| |
| |
| |
| |
|
|
|
|
| | |
|
| Template Sequence | |
K | F | C | A | D | C | Q | S | K | G | P | R | W | A | S | W | N | I | G | V | F | I | C | I | R | C |
| Template Known Secondary structure | |
G | B |
| T | T | T |
|
| B | S |
|
| | | | T | T | T | T | | | |
|  | | |
| Template Predicted Secondary structure | |
| | | | |
|
|
|
|
|
|
| | | |
|
|
|
| | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
