Return to main results Retrieve Phyre Job Id

Job DescriptionP76102
Confidence39.18%DateThu Jan 5 12:18:56 GMT 2012
Rank228Aligned Residues27
% Identity19%Templatec2drpD_
PDB info PDB header:transcription/dnaChain: D: PDB Molecule:protein (tramtrack dna-binding domain); PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.... .320.........330.........340
Predicted Secondary structure 




...........















Query SS confidence 




. . . . . . . . . . .





















Query Sequence  CAYCG. . . . . . . . . . . HTAKENRLSQSKFRCQVCGYTA
Query Conservation 
  

...........          
   
  

   
Alig confidence 




...........





















Template Conservation 
  
 
 
     
  
    
        
  
   
Template Sequence  CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF
Template Known Secondary structure  TTT

SST
SS



TTT

Template Predicted Secondary structure 























Template SS confidence 





































   113......120.........130.........140.........150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions