 |
Job Description | P08373 | Confidence | 16.92% | Date | Thu Jan 5 11:01:23 GMT 2012 |
Rank | 96 | Aligned Residues | 94 |
% Identity | 15% | Template | d1ps9a1 |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.20 |
|
 |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  | . | . | . | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | K | V | N | G | N | A | G | S | F | F | K | N | P | V | V | S | A | E | T | A | K | A | L | L | S | Q | F | P | T | A | P | N | Y | P | Q | A | D | G | S | V | K | L | A | A | G | W | L | I | D | Q | C | Q | L | K | G | M | Q | I | G | G | A | . |
. |
. |
. |
. |
. |
A | V | H | R | Q | Q | A | L | V | L | I | N |
Query Conservation |   |
|   |   |   |   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |
| . | . | . | . | . | . |   |
|
|   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|   |
|
Template Sequence |   |
P | S | A | L | Q | A | P | I | N | R | F | V | P | H | E | L | S | H | E | E | I | L | Q | L | I | D | N | F | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | A | Q | L | A | R | E | A | G | Y | D | G | V | E | V | M | G | S | E | G | Y | L | I | N | E | F | L | T | L | R | T | N | Q | R | S | D |
Template Known Secondary structure |   |
S | S | S |
|
|
| T | T |
| S | S |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| B | T | S |  |  |  |  |  |  |
| T | T | T |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |
  |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | N | A | K | S | E | D | V | V | Q | L | A | H | H | V | R | Q | K | V | G | E | K | F | N | V | W | L | E | P | E | V | R | F |
Query Conservation |   |
  |
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|   |
|
|
|
Template Sequence |   |
Q | W | G | G | D | Y | R | N | R | M | R | F | A | V | E | V | V | R | A | V | R | E | R | V | G | N | D | F | I | I | I | Y | R | L |
Template Known Secondary structure |   |
T | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|