Return to main results Retrieve Phyre Job Id

Job DescriptionP08373
Confidence100.00%DateThu Jan 5 11:01:23 GMT 2012
Rank7Aligned Residues175
% Identity25%Templated1hska1
SCOP infoFAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  NHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYL
Query Conservation 
  
   

  


 
  

 
 
 


   
  
    


 








  
   
 

        
  
     
Alig confidence 











































































..

Template Conservation 
  
        

 
  

 
 
  

  

  
        
 
 
            
 
             .. 
Template Sequence  DEPLKRYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIEVSDD. . AI
Template Known Secondary structure  GGGT
TTS




SSTT

SS
SS



TT

TT


TT..
Template Predicted Secondary structure 













































..
Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100......... 110.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  HVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDS
Query Conservation   
 

  
  
       

 


 
 









 






  
 
 
 

 


   
        
  
 

 
Alig confidence 

























































.




















Template Conservation   
 

     
   
   
           




    
 
  
    
 
    

.   
        

   

 
Template Sequence  IAGSGAAIIDVSRVARDYALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCV. NEQGSLIKLTTKELELDYRNS
Template Known Secondary structure  TTSBTT
BS
GGGTT

SBT
TT.
TTS
TTTTT
BTTB
Template Predicted Secondary structure 

































.








Template SS confidence 















































































   112.......120.........130.........140.........150.........160......... 170.........180.........190
 
   162.......170.........180..
Predicted Secondary structure 









Query SS confidence 




















Query Sequence  IFKHEYQDRFAIVAVGLRLPK
Query Conservation   
        


 
 
 
  
Alig confidence 



...













Template Conservation      ...  



 
   
 
Template Sequence  IIQK. . . EHLVVLEAAFTLAP
Template Known Secondary structure  ...TT

B
Template Predicted Secondary structure 



...


Template SS confidence 




















   191... .....200........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions