Return to main results Retrieve Phyre Job Id

Job DescriptionP08373
Confidence99.94%DateThu Jan 5 11:01:23 GMT 2012
Rank14Aligned Residues170
% Identity17%Templatec3pm9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative dehydrogenase (rpa1076) from2 rhodopseudomonas palustris cga009 at 2.57 a resolution
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50...... ...60.........70.. .......80.......
Predicted Secondary structure 

















.








.





Query SS confidence 














































.















.














Query Sequence  TFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLE. DYRGTVIINRIKGIEI. HDEPDAWYLHVGAGE
Query Conservation 
  


 
  

 
 
 


   
  
    


 








  
.   
 

        
.  
     
 
 

 
Alig confidence 














































.















.














Template Conservation         
  

 
    

   
  
      
  

 


  
 
        


  
  
   
     
 
 

 
Template Sequence  RNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHNGEVVISLKRXDKIREIDTSSNTITVEAGA
Template Known Secondary structure  T


B


S



ST

SSS

SSSTT


SS

TT


TTTTTT
Template Predicted Secondary structure 










































Template SS confidence 















































































   44.....50.........60.........70.........80.........90.........100.........110.........120...
 
   88.90.........100.........110.. .......120...... ...130.........140.........150.. ..
Predicted Secondary structure 














.






....





........
Query SS confidence 
























.













. . . .

























. . . . . . . .

Query Sequence  NWHRLVKYTLQEGMPGLENLALIPG. CVGSSPIQNIGAYG. . . . VELQRVCAYVDSVELATGKQVRLTAK. . . . . . . . EC
Query Conservation   
  
       

 


 
 



.





 






....  
 
 
 

 


   
        ........
 
Alig confidence 
























.













....












.











........

Template Conservation      
   
   
              


    

 
      
   
 
    

. 


 

             

Template Sequence  ILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDXALGVEVV. LADGRVXNLLSKLKKDNTGYDL
Template Known Secondary structure  BTT




TTTTT
BT


TT

.
TTS





S


SS


Template Predicted Secondary structure 






























.















Template SS confidence 















































































   124.....130.........140.........150.........160.........170.........180 .........190.........200..
 
   155....160.........170.........180.....
Predicted Secondary structure 

















Query SS confidence 






























Query Sequence  RFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ
Query Conservation   
 

 
 
        


 
 
 
     
Alig confidence 




.....




















Template Conservation 
 
  .....

 
 




  

   
   
Template Sequence  RDLFI. . . . . GAEGTLGIITAATLKLFPKPR
Template Known Secondary structure  T.....TSTTSS



S
Template Predicted Secondary structure  .....







Template SS confidence 






























   203.... ..210.........220........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions