Job Description P08373 Confidence 100.00% Date Thu Jan 5 11:01:23 GMT 2012 Rank 2 Aligned Residues 333 % Identity 50% Template c3i99A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-n-acetylenolpyruvoylglucosamine reductase; PDBTitle: the crystal structure of the udp-n-acetylenolpyruvoylglucosamine2 reductase from the vibrio cholerae o1 biovar tor Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	S	L	K	P	W	N	T	F	G	I	D	H	N	A	Q	H	I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	E	D	Y	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	D	E	P	D	A	W	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	N	L	K	P	Y	H	T	F	G	I	E	Q	L	A	A	Q	L	V	V	A	E	S	I	D	D	L	K	A	L	Y	C	S	A	E	W	A	S	L	P	K	L	I	I	G	K	G	S	N	X	L	F	T	C	H	Y	T	G	X	I	V	V	N	R	L	N	G	I	E	H	Q	Q	D	D	D	Y	H	R	L
Template Known Secondary structure					S	G	G	G	S	T	T			S											S									S	S	S	T	T	T	T	S						S	S		T	T					S																				S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	G	A	G	E	N	W	H	R	L	V	K	Y	T	L	Q	E	G	M	P	G	L	E	N	L	A	L	I	P	G	C	V	G	S	S	P	I	Q	N	I	G	A	Y	G	V	E	L	Q	R	V	C	A	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	A	K	E	C	R	F	G	Y	R	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	A	G	G	E	D	W	P	S	L	V	S	W	C	V	E	Q	G	I	G	G	L	E	N	L	A	L	I	P	G	C	A	G	S	A	P	I	Q	N	I	G	A	Y	G	V	E	F	K	D	V	C	D	Y	V	E	Y	L	C	L	E	T	G	T	V	K	R	L	T	X	E	E	C	Q	F	G	Y	R	D	S
Template Known Secondary structure					T	T	S	B											T	T		T	T		G	G	G	T	T			S	B	G	G	G	T	T	T	T	T				T	T			G	G	G	T									T	T	T	T							T	G	G	G			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W	Q	P	V	L	T	Y	G	D	L	T	R	L	D	P	T	T	V	T	P	Q	Q	V	F	N	A	V	C	H	M	R	T	T	K	L	P	D	P	K	V	N	G	N	A	G	S	F	F	K	N	P	V	V	S	A	E	T	A
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		I	F	K	H	Q	L	Y	Q	K	A	V	V	T	A	V	G	L	K	F	A	K	A	W	Q	P	I	I	Q	Y	G	P	L	K	D	L	S	S	D	C	.	A	I	H	D	V	Y	Q	R	V	C	A	T	R	X	E	K	L	P	D	P	A	V	X	G	N	A	G	S	F	F	K	N	P	V	I	S	Q	Q	A	F
Template Known Secondary structure		G	G	G	T	T	T	T	T	T												S	S							S	G	G	G	G	G	S		T	T		.																	S			T	T	T	S						S	B
Template Predicted Secondary structure																																									.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	L	S	Q	F	P	T	A	P	N	Y	P	Q	A	D	G	S	V	K	L	A	A	G	W	L	I	D	Q	C	Q	L	K	G	M	Q	I	G	G	A	A	V	H	R	Q	Q	A	L	V	L	I	N	E	D	N	A	K	S	E	D	V	V	Q	L	A	H	H	V	R	Q	K	V	G	E	K	F	N	V	W
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		A	R	L	Q	I	E	H	P	D	V	V	A	Y	P	.	A	E	Q	G	V	K	V	A	A	G	W	L	I	D	Q	A	G	L	K	G	H	Q	I	G	G	A	K	V	H	P	K	Q	A	L	V	I	V	N	T	G	D	A	S	A	Q	D	V	L	X	L	A	A	D	I	Q	Q	R	V	F	N	C	Y	G	I	E
Template Known Secondary structure									T	T						.		S	S	S												T	T		T	T				T	T					T	T	S	T	T						S	S																						S
Template Predicted Secondary structure																.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	P	E	V	R	F	I	G	A	S	G	E	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	H	E	V	R	F	I	G	E	S	E	E	T	N
Template Known Secondary structure				B		S					S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions