Job Description P08373 Confidence 98.18% Date Thu Jan 5 11:01:23 GMT 2012 Rank 37 Aligned Residues 155 % Identity 15% Template c3hrdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinate dehydrogenase fad-subunit; PDBTitle: crystal structure of nicotinate dehydrogenase Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																						.	.	.																			.																						.
Query SS confidence																																						.	.	.																			.																						.
Query Sequence		I	V	C	A	E	D	E	Q	Q	L	L	N	A	W	Q	Y	A	T	A	E	G	Q	P	V	L	I	L	G	E	G	S	N	V	L	F	L	.	.	.	E	D	Y	R	G	T	V	I	I	N	R	I	K	G	I	E	I	H	.	D	E	P	D	A	W	Y	L	H	V	G	A	G	E	N	W	H	R	L	V	K	.
Query Conservation																																						.	.	.																			.																						.
Alig confidence																	.	.																				.	.	.																			.																						.
Template Conservation																	.	.
Template Sequence		F	F	A	P	K	T	L	E	E	A	K	G	L	L	H	.	.	Q	Y	K	D	V	P	P	A	I	I	A	G	G	T	D	L	V	I	E	I	N	D	R	W	E	K	P	D	V	V	I	D	I	K	K	L	K	E	L	E	Y	I	R	V	E	E	N	T	I	H	I	G	A	L	S	T	F	T	Q	I	E	N	H
Template Known Secondary structure						S	S										.	.		T	T	T	S						S	S		T	T							T	T	S				S						T	T		G	G	G							S	S						T	T		B
Template Predicted Secondary structure																	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																								.	.	.	.																								.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																								.	.	.	.																								.	.	.
Query Sequence		Y	T	L	Q	E	G	M	P	G	L	E	N	L	A	L	I	P	.	.	.	.	.	.	.	.	G	C	V	G	S	S	P	I	Q	N	I	G	A	Y	G	V	E	L	Q	R	V	C	A	.	.	.	.	Y	V	D	S	V	E	L	A	T	G	K	Q	V	R	L	T	A	K	E	C	R	F	G	.	.	.	Y	R
Query Conservation																			.	.	.	.	.	.	.	.																								.	.	.	.																								.	.	.
Alig confidence																			.	.	.	.	.	.	.	.										.	.													.	.	.	.							.				.													.	.	.
Template Conservation																																				.	.																							.				.
Template Sequence		P	F	I	R	S	H	V	R	A	L	Y	K	A	A	S	Q	V	G	S	P	Q	I	R	N	L	G	T	I	G	G	N	L	S	T	.	.	S	S	V	A	G	D	G	V	S	A	M	T	T	L	D	A	T	V	V	L	E	S	.	V	R	G	.	T	R	Q	M	K	L	T	D	F	F	D	G	E	G	F	K	R
Template Known Secondary structure																	T	S	S									B								.	.	T		T	T										T	T								.	T	T		.														S	S	S	S
Template Predicted Secondary structure																																				.	.																							.				.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	I	F	K	H	E	Y	Q	D	R	F	A	I	V	A	V	G	L	R	L	P	K	E	W
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		R	N	A	L	E	A	D	E	.	.	.	.	I	M	T	E	V	I	I	D	R	P	D	A	H
Template Known Secondary structure		S	S	S			T	T		.	.	.	.												T	T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions